RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 VEGFAP15692 232 aaPredicted RBP20.73■□□□□ 0.91
CTSB-215ENST00000528965 DCTN1Q14203 1278 aa20.73■□□□□ 0.91
CTSB-215ENST00000528965 TAF7Q15545 349 aaPredicted RBP20.73■□□□□ 0.91
CTSB-215ENST00000528965 CCDC24Q8N4L8 307 aa20.73■□□□□ 0.91
CTSB-215ENST00000528965 PNISRQ8TF01 805 aaKnown RBP20.73■□□□□ 0.91
CTSB-215ENST00000528965 PIP4K2AP48426 406 aaPredicted RBP20.72■□□□□ 0.91
CTSB-215ENST00000528965 DPY19L2Q6NUT2 758 aa20.72■□□□□ 0.91
CTSB-215ENST00000528965 MASTLQ96GX5 879 aa20.72■□□□□ 0.91
CTSB-215ENST00000528965 TAOK3Q9H2K8 898 aa20.72■□□□□ 0.91
CTSB-215ENST00000528965 LTBP3Q9NS15 1303 aa20.72■□□□□ 0.91
CTSB-215ENST00000528965 PRAMEF22A3QJZ6 481 aa20.71■□□□□ 0.91
CTSB-215ENST00000528965 SRGNP10124 158 aa20.71■□□□□ 0.91
CTSB-215ENST00000528965 PRELPP51888 382 aa20.71■□□□□ 0.91
CTSB-215ENST00000528965 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
CTSB-215ENST00000528965 ZNF219Q9P2Y4 722 aaPredicted RBP20.71■□□□□ 0.91
CTSB-215ENST00000528965 LAMB4A4D0S4 1761 aa20.71■□□□□ 0.91
CTSB-215ENST00000528965 ERFEQ4G0M1 354 aa20.7■□□□□ 0.9
CTSB-215ENST00000528965 PRPF40BQ6NWY9 871 aaKnown RBP20.7■□□□□ 0.9
CTSB-215ENST00000528965 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
CTSB-215ENST00000528965 DNAJC5GQ8N7S2 189 aa20.69■□□□□ 0.9
CTSB-215ENST00000528965 NIP7Q9Y221 180 aaKnown RBP eCLIP20.69■□□□□ 0.9
CTSB-215ENST00000528965 MAPK8IP3Q9UPT6 1336 aa20.69■□□□□ 0.9
CTSB-215ENST00000528965 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
CTSB-215ENST00000528965 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
CTSB-215ENST00000528965 NBPF26B4DH59 902 aa20.67■□□□□ 0.9
CTSB-215ENST00000528965 NBPF10Q6P3W6 841 aaKnown RBP20.67■□□□□ 0.9
CTSB-215ENST00000528965 NBPF15Q8N660 670 aa20.67■□□□□ 0.9
CTSB-215ENST00000528965 KLRG1Q96E93 195 aa20.67■□□□□ 0.9
CTSB-215ENST00000528965 NPR1P16066 1061 aa20.66■□□□□ 0.9
CTSB-215ENST00000528965 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
CTSB-215ENST00000528965 CCDC88AQ3V6T2 1871 aa20.66■□□□□ 0.9
CTSB-215ENST00000528965 KDM3BQ7LBC6 1761 aa20.65■□□□□ 0.9
CTSB-215ENST00000528965 CCDC93Q567U6 631 aa20.65■□□□□ 0.9
CTSB-215ENST00000528965 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
CTSB-215ENST00000528965 GTF2E1P29083 439 aaPredicted RBP20.64■□□□□ 0.89
CTSB-215ENST00000528965 KIF6Q6ZMV9 814 aa20.64■□□□□ 0.89
CTSB-215ENST00000528965 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
CTSB-215ENST00000528965 CACNA1SQ13698 1873 aa20.64■□□□□ 0.89
CTSB-215ENST00000528965 SLX4Q8IY92 1834 aa20.64■□□□□ 0.89
CTSB-215ENST00000528965 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
CTSB-215ENST00000528965 NYXQ9GZU5 481 aa20.63■□□□□ 0.89
CTSB-215ENST00000528965 DLG5Q8TDM6 1919 aa20.63■□□□□ 0.89
CTSB-215ENST00000528965 KLRG2A4D1S0 409 aaPredicted RBP20.62■□□□□ 0.89
CTSB-215ENST00000528965 HTRA3P83110 453 aa20.62■□□□□ 0.89
CTSB-215ENST00000528965 FAM177BA6PVY3 158 aa20.61■□□□□ 0.89
CTSB-215ENST00000528965 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
CTSB-215ENST00000528965 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
CTSB-215ENST00000528965 IBTKQ9P2D0 1353 aaPredicted RBP20.6■□□□□ 0.89
CTSB-215ENST00000528965 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
CTSB-215ENST00000528965 ALDH1B1P30837 517 aa20.6■□□□□ 0.89
CTSB-215ENST00000528965 FKBP4Q02790 459 aaKnown RBP eCLIP20.6■□□□□ 0.89
CTSB-215ENST00000528965 HLFQ16534 295 aa20.6■□□□□ 0.89
CTSB-215ENST00000528965 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
CTSB-215ENST00000528965 JMYQ8N9B5 988 aa20.6■□□□□ 0.89
CTSB-215ENST00000528965 ERBB4Q15303 1308 aa20.59■□□□□ 0.89
CTSB-215ENST00000528965 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
CTSB-215ENST00000528965 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
CTSB-215ENST00000528965 RALBP1Q15311 655 aa20.58■□□□□ 0.89
CTSB-215ENST00000528965 C7orf43Q8WVR3 580 aa20.58■□□□□ 0.89
CTSB-215ENST00000528965 RRP7AQ9Y3A4 280 aaKnown RBP20.58■□□□□ 0.89
CTSB-215ENST00000528965 POTECB2RU33 542 aa20.57■□□□□ 0.88
CTSB-215ENST00000528965 LMOD3Q0VAK6 560 aa20.57■□□□□ 0.88
CTSB-215ENST00000528965 THUMPD2Q9BTF0 503 aaKnown RBP20.57■□□□□ 0.88
CTSB-215ENST00000528965 RIC1Q4ADV7 1423 aa20.56■□□□□ 0.88
CTSB-215ENST00000528965 DDNO94850 711 aaPredicted RBP20.56■□□□□ 0.88
CTSB-215ENST00000528965 MYL6BP14649 208 aa20.56■□□□□ 0.88
CTSB-215ENST00000528965 TSPYL4Q9UJ04 414 aa20.56■□□□□ 0.88
CTSB-215ENST00000528965 ABCC12Q96J65 1359 aa20.56■□□□□ 0.88
CTSB-215ENST00000528965 CHADLQ6NUI6 762 aa20.55■□□□□ 0.88
CTSB-215ENST00000528965 RPGRQ92834 1020 aaKnown RBP20.55■□□□□ 0.88
CTSB-215ENST00000528965 L3MBTL3Q96JM7 780 aaPredicted RBP20.55■□□□□ 0.88
CTSB-215ENST00000528965 CRY2Q49AN0 593 aa20.54■□□□□ 0.88
CTSB-215ENST00000528965 CC2D2BQ6DHV5 1058 aa20.54■□□□□ 0.88
CTSB-215ENST00000528965 ZBTB3Q9H5J0 574 aa20.54■□□□□ 0.88
CTSB-215ENST00000528965 ZNF277Q9NRM2 450 aaPredicted RBP20.54■□□□□ 0.88
CTSB-215ENST00000528965 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
CTSB-215ENST00000528965 RIPK4P57078 832 aa20.53■□□□□ 0.88
CTSB-215ENST00000528965 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
CTSB-215ENST00000528965 NUTM1Q86Y26 1132 aa20.53■□□□□ 0.88
CTSB-215ENST00000528965 NUP98P52948 1817 aa20.53■□□□□ 0.88
CTSB-215ENST00000528965 GPTP24298 496 aa20.52■□□□□ 0.88
CTSB-215ENST00000528965 IARSP41252 1262 aaKnown RBP20.52■□□□□ 0.88
CTSB-215ENST00000528965 GRIPAP1Q4V328 841 aa20.52■□□□□ 0.88
CTSB-215ENST00000528965 PARP10Q53GL7 1025 aa20.52■□□□□ 0.88
CTSB-215ENST00000528965 LDHDQ86WU2 507 aa20.52■□□□□ 0.88
CTSB-215ENST00000528965 PSMD1Q99460 953 aa20.52■□□□□ 0.88
CTSB-215ENST00000528965 SCN4AP35499 1836 aa20.51■□□□□ 0.87
CTSB-215ENST00000528965 GIGYF2Q6Y7W6 1299 aaKnown RBP20.51■□□□□ 0.87
CTSB-215ENST00000528965 PPP1R42Q7Z4L9 355 aa20.51■□□□□ 0.87
CTSB-215ENST00000528965 UBN2Q6ZU65 1347 aa20.51■□□□□ 0.87
CTSB-215ENST00000528965 SYNE4Q8N205 404 aa20.5■□□□□ 0.87
CTSB-215ENST00000528965 JDP2Q8WYK2 163 aa20.5■□□□□ 0.87
CTSB-215ENST00000528965 CREBZFQ9NS37 354 aa20.5■□□□□ 0.87
CTSB-215ENST00000528965 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
CTSB-215ENST00000528965 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
CTSB-215ENST00000528965 HOXA10P31260 410 aaPredicted RBP20.49■□□□□ 0.87
CTSB-215ENST00000528965 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
CTSB-215ENST00000528965 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
CTSB-215ENST00000528965 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
CTSB-215ENST00000528965 TAF1DQ9H5J8 278 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms