RNA–Protein interactions for RNA: ENST00000527380.1

PACS1-206, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-206ENST00000527380 RNF123Q5XPI4 1314 aa8.68□□□□□ -1.02
PACS1-206ENST00000527380 SNRPA1P09661 255 aaKnown RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 HMGB2P26583 209 aaKnown RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 PRIM1P49642 420 aaKnown RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 RRP1P56182 461 aaKnown RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 NHSQ6T4R5 1651 aa8.67□□□□□ -1.02
PACS1-206ENST00000527380 FAM196AQ6ZSG2 479 aa8.67□□□□□ -1.02
PACS1-206ENST00000527380 KRT27Q7Z3Y8 459 aa8.67□□□□□ -1.02
PACS1-206ENST00000527380 IFNLR1Q8IU57 520 aaPredicted RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 PIGBQ92521 554 aa8.67□□□□□ -1.02
PACS1-206ENST00000527380 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 TEX13AQ9BXU3 409 aaPredicted RBP8.67□□□□□ -1.02
PACS1-206ENST00000527380 HEG1Q9ULI3 1381 aa8.67□□□□□ -1.02
PACS1-206ENST00000527380 LAMB4A4D0S4 1761 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 ELL2O00472 640 aaPredicted RBP8.66□□□□□ -1.02
PACS1-206ENST00000527380 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
PACS1-206ENST00000527380 SLC39A6Q13433 755 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 HDGFL1Q5TGJ6 251 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 TSPYL6Q8N831 410 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 SSH1Q8WYL5 1049 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 BRWD3Q6RI45 1802 aa8.66□□□□□ -1.02
PACS1-206ENST00000527380 PTPRCP08575 1304 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 KCNQ3O43525 872 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 ARHGAP45Q92619 1136 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 ZNF496Q96IT1 587 aaPredicted RBP8.65□□□□□ -1.02
PACS1-206ENST00000527380 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 BOLA1Q9Y3E2 137 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 SBF2Q86WG5 1849 aa8.65□□□□□ -1.02
PACS1-206ENST00000527380 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
PACS1-206ENST00000527380 BCAR3O75815 825 aa8.64□□□□□ -1.03
PACS1-206ENST00000527380 PDE3AQ14432 1141 aa8.64□□□□□ -1.03
PACS1-206ENST00000527380 KRT24Q2M2I5 525 aa8.64□□□□□ -1.03
PACS1-206ENST00000527380 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
PACS1-206ENST00000527380 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
PACS1-206ENST00000527380 API5Q9BZZ5 524 aaKnown RBP8.64□□□□□ -1.03
PACS1-206ENST00000527380 DBF4Q9UBU7 674 aaPredicted RBP8.64□□□□□ -1.03
PACS1-206ENST00000527380 RGS12O14924 1447 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 ZNF831Q5JPB2 1677 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 STARD3NLO95772 234 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 HOXB1P14653 301 aaPredicted RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 EIF2S2P20042 333 aaKnown RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 ATF7IPQ6VMQ6 1270 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 FTSJ3Q8IY81 847 aaKnown RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 SPOCK2Q92563 424 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 FRAT1Q92837 279 aaPredicted RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 BCL2L13Q9BXK5 485 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 CHMP4BQ9H444 224 aaKnown RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 HYPKQ9NX55 129 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 RGS17Q9UGC6 210 aaPredicted RBP8.63□□□□□ -1.03
PACS1-206ENST00000527380 ASAP1Q9ULH1 1129 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 BTAF1O14981 1849 aa8.63□□□□□ -1.03
PACS1-206ENST00000527380 C5P01031 1676 aa8.62□□□□□ -1.03
PACS1-206ENST00000527380 PALLDQ8WX93 1383 aa8.62□□□□□ -1.03
PACS1-206ENST00000527380 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
PACS1-206ENST00000527380 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
PACS1-206ENST00000527380 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
PACS1-206ENST00000527380 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
PACS1-206ENST00000527380 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
PACS1-206ENST00000527380 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
PACS1-206ENST00000527380 NOB1Q9ULX3 412 aaKnown RBP8.62□□□□□ -1.03
PACS1-206ENST00000527380 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
PACS1-206ENST00000527380 KCNQ2O43526 872 aa8.61□□□□□ -1.03
PACS1-206ENST00000527380 SIK1P57059 783 aa8.61□□□□□ -1.03
PACS1-206ENST00000527380 AAMPQ13685 434 aa8.61□□□□□ -1.03
PACS1-206ENST00000527380 DZIP1LQ8IYY4 767 aaKnown RBP8.61□□□□□ -1.03
PACS1-206ENST00000527380 CHPF2Q9P2E5 772 aa8.61□□□□□ -1.03
PACS1-206ENST00000527380 PLIN1O60240 522 aa8.6□□□□□ -1.03
PACS1-206ENST00000527380 ATP6V1AP38606 617 aa8.6□□□□□ -1.03
PACS1-206ENST00000527380 FLIIQ13045 1269 aa8.6□□□□□ -1.03
PACS1-206ENST00000527380 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
PACS1-206ENST00000527380 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
PACS1-206ENST00000527380 LY75O60449 1722 aa8.6□□□□□ -1.03
PACS1-206ENST00000527380 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 TCERG1O14776 1098 aaKnown RBP8.59□□□□□ -1.03
PACS1-206ENST00000527380 TRIM27P14373 513 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 NECTIN2Q92692 538 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 CIZ1Q9ULV3 898 aaPredicted RBP8.59□□□□□ -1.03
PACS1-206ENST00000527380 DDX19BQ9UMR2 479 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 TJP1Q07157 1748 aa8.59□□□□□ -1.03
PACS1-206ENST00000527380 ABCC4O15439 1325 aa8.58□□□□□ -1.04
PACS1-206ENST00000527380 PRAMEF22A3QJZ6 481 aa8.58□□□□□ -1.04
PACS1-206ENST00000527380 TRIM37O94972 964 aa8.58□□□□□ -1.04
PACS1-206ENST00000527380 CCT4P50991 539 aaKnown RBP8.58□□□□□ -1.04
PACS1-206ENST00000527380 MVPQ14764 893 aaKnown RBP8.58□□□□□ -1.04
PACS1-206ENST00000527380 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
PACS1-206ENST00000527380 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
PACS1-206ENST00000527380 COL5A3P25940 1745 aaPredicted RBP8.57□□□□□ -1.04
PACS1-206ENST00000527380 CYP19A1P11511 503 aaPredicted RBP8.57□□□□□ -1.04
PACS1-206ENST00000527380 MYL6BP14649 208 aa8.57□□□□□ -1.04
PACS1-206ENST00000527380 IL6STP40189 918 aaPredicted RBP8.57□□□□□ -1.04
PACS1-206ENST00000527380 PDIA6Q15084 440 aa8.57□□□□□ -1.04
PACS1-206ENST00000527380 KSR2Q6VAB6 950 aa8.57□□□□□ -1.04
PACS1-206ENST00000527380 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms