RNA–Protein interactions for RNA: ENST00000526940.1

NFRKB-205, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 2 BASIC

Gene NFRKB, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-205ENST00000526940 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
NFRKB-205ENST00000526940 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
NFRKB-205ENST00000526940 KNSTRNQ9Y448 316 aa13.13□□□□□ -0.31
NFRKB-205ENST00000526940 NPC1L1Q9UHC9 1359 aa13.12□□□□□ -0.31
NFRKB-205ENST00000526940 ITGB4P16144 1822 aa13.12□□□□□ -0.31
NFRKB-205ENST00000526940 SMAPO00193 183 aa13.12□□□□□ -0.31
NFRKB-205ENST00000526940 EYA1Q99502 592 aa13.12□□□□□ -0.31
NFRKB-205ENST00000526940 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
NFRKB-205ENST00000526940 OATP04181 439 aa13.11□□□□□ -0.31
NFRKB-205ENST00000526940 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
NFRKB-205ENST00000526940 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-205ENST00000526940 EXOC5O00471 708 aa13.1□□□□□ -0.31
NFRKB-205ENST00000526940 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-205ENST00000526940 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
NFRKB-205ENST00000526940 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
NFRKB-205ENST00000526940 MORC1Q86VD1 984 aa13.1□□□□□ -0.31
NFRKB-205ENST00000526940 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
NFRKB-205ENST00000526940 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
NFRKB-205ENST00000526940 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
NFRKB-205ENST00000526940 LY75O60449 1722 aa13.09□□□□□ -0.31
NFRKB-205ENST00000526940 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
NFRKB-205ENST00000526940 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.32
NFRKB-205ENST00000526940 LAPTM4BQ86VI4 370 aa13.08□□□□□ -0.32
NFRKB-205ENST00000526940 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.32
NFRKB-205ENST00000526940 AK7Q96M32 723 aa13.08□□□□□ -0.32
NFRKB-205ENST00000526940 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
NFRKB-205ENST00000526940 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
NFRKB-205ENST00000526940 BAG6P46379 1132 aa13.07□□□□□ -0.32
NFRKB-205ENST00000526940 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
NFRKB-205ENST00000526940 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
NFRKB-205ENST00000526940 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
NFRKB-205ENST00000526940 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
NFRKB-205ENST00000526940 KCNQ2O43526 872 aa13.06□□□□□ -0.32
NFRKB-205ENST00000526940 APBA3O96018 575 aa13.05□□□□□ -0.32
NFRKB-205ENST00000526940 RNF166Q96A37 237 aaPredicted RBP13.05□□□□□ -0.32
NFRKB-205ENST00000526940 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
NFRKB-205ENST00000526940 IL13P35225 146 aa13.04□□□□□ -0.32
NFRKB-205ENST00000526940 MTHFSP49914 203 aa13.04□□□□□ -0.32
NFRKB-205ENST00000526940 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
NFRKB-205ENST00000526940 ACSBG1Q96GR2 724 aa13.04□□□□□ -0.32
NFRKB-205ENST00000526940 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
NFRKB-205ENST00000526940 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
NFRKB-205ENST00000526940 TRIM66O15016 1216 aa13.03□□□□□ -0.32
NFRKB-205ENST00000526940 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
NFRKB-205ENST00000526940 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
NFRKB-205ENST00000526940 DDX54Q8TDD1 881 aaKnown RBP13.03□□□□□ -0.32
NFRKB-205ENST00000526940 KDRP35968 1356 aa13.03□□□□□ -0.32
NFRKB-205ENST00000526940 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
NFRKB-205ENST00000526940 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.32
NFRKB-205ENST00000526940 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.32
NFRKB-205ENST00000526940 CYP27B1O15528 508 aa13.02□□□□□ -0.33
NFRKB-205ENST00000526940 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
NFRKB-205ENST00000526940 RAPGEF4Q8WZA2 1011 aa13.02□□□□□ -0.33
NFRKB-205ENST00000526940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
NFRKB-205ENST00000526940 PLSCR1O15162 318 aa13.01□□□□□ -0.33
NFRKB-205ENST00000526940 DNAJB2P25686 324 aa13.01□□□□□ -0.33
NFRKB-205ENST00000526940 ZFRQ96KR1 1074 aaKnown RBP13.01□□□□□ -0.33
NFRKB-205ENST00000526940 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
NFRKB-205ENST00000526940 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
NFRKB-205ENST00000526940 PLEKHG2Q9H7P9 1386 aa13.01□□□□□ -0.33
NFRKB-205ENST00000526940 ADAMTS7Q9UKP4 1686 aa13□□□□□ -0.33
NFRKB-205ENST00000526940 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
NFRKB-205ENST00000526940 LRP5O75197 1615 aa12.99□□□□□ -0.33
NFRKB-205ENST00000526940 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
NFRKB-205ENST00000526940 C5P01031 1676 aa12.99□□□□□ -0.33
NFRKB-205ENST00000526940 AMHR2Q16671 573 aa12.98□□□□□ -0.33
NFRKB-205ENST00000526940 TMEM134Q9H6X4 195 aa12.98□□□□□ -0.33
NFRKB-205ENST00000526940 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
NFRKB-205ENST00000526940 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
NFRKB-205ENST00000526940 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
NFRKB-205ENST00000526940 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
NFRKB-205ENST00000526940 PHKG2P15735 406 aa12.96□□□□□ -0.33
NFRKB-205ENST00000526940 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
NFRKB-205ENST00000526940 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
NFRKB-205ENST00000526940 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.34
NFRKB-205ENST00000526940 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
NFRKB-205ENST00000526940 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
NFRKB-205ENST00000526940 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
NFRKB-205ENST00000526940 SAMD7Q7Z3H4 446 aa12.95□□□□□ -0.34
NFRKB-205ENST00000526940 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
NFRKB-205ENST00000526940 DLG5Q8TDM6 1919 aa12.95□□□□□ -0.34
NFRKB-205ENST00000526940 HMOX1P09601 288 aa12.94□□□□□ -0.34
NFRKB-205ENST00000526940 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
NFRKB-205ENST00000526940 PDE4DQ08499 809 aa12.94□□□□□ -0.34
NFRKB-205ENST00000526940 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
NFRKB-205ENST00000526940 WNT2BQ93097 391 aa12.94□□□□□ -0.34
NFRKB-205ENST00000526940 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
NFRKB-205ENST00000526940 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
NFRKB-205ENST00000526940 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
NFRKB-205ENST00000526940 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
NFRKB-205ENST00000526940 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
NFRKB-205ENST00000526940 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
NFRKB-205ENST00000526940 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
NFRKB-205ENST00000526940 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
NFRKB-205ENST00000526940 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
NFRKB-205ENST00000526940 MRC1P22897 1456 aa12.92□□□□□ -0.34
NFRKB-205ENST00000526940 CICQ96RK0 1608 aaPredicted RBP12.92□□□□□ -0.34
NFRKB-205ENST00000526940 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
NFRKB-205ENST00000526940 REPIN1Q9BWE0 567 aaKnown RBP12.92□□□□□ -0.34
NFRKB-205ENST00000526940 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms