RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 RRP9O43818 475 aaKnown RBP14.05□□□□□ -0.16
LINC01001-201ENST00000526704 OS9Q13438 667 aaPredicted RBP14.05□□□□□ -0.16
LINC01001-201ENST00000526704 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.05□□□□□ -0.16
LINC01001-201ENST00000526704 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 ZMYND15Q9H091 742 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 HEG1Q9ULI3 1381 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 PROSER3Q2NL68 480 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 DBF4Q9UBU7 674 aaPredicted RBP14.05□□□□□ -0.16
LINC01001-201ENST00000526704 LIMCH1Q9UPQ0 1083 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 MAP3K2Q9Y2U5 619 aa14.05□□□□□ -0.16
LINC01001-201ENST00000526704 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
LINC01001-201ENST00000526704 RNMTO43148 476 aaKnown RBP14.04□□□□□ -0.16
LINC01001-201ENST00000526704 LARGE1O95461 756 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 ZSCAN22P10073 491 aaPredicted RBP14.04□□□□□ -0.16
LINC01001-201ENST00000526704 CPA1P15085 419 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 KCNH5Q8NCM2 988 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 LARP6Q9BRS8 491 aaKnown RBP14.04□□□□□ -0.16
LINC01001-201ENST00000526704 CNPY2Q9Y2B0 182 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 ALDH1L1O75891 902 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 PTH1RQ03431 593 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 HSP90AA2PQ14568 343 aaPredicted RBP14.04□□□□□ -0.16
LINC01001-201ENST00000526704 PLEKHO1Q53GL0 409 aaPredicted RBP14.04□□□□□ -0.16
LINC01001-201ENST00000526704 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
LINC01001-201ENST00000526704 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
LINC01001-201ENST00000526704 SCN11AQ9UI33 1791 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 CASTP20810 708 aaKnown RBP14.03□□□□□ -0.16
LINC01001-201ENST00000526704 CLASRPQ8N2M8 674 aaKnown RBP14.03□□□□□ -0.16
LINC01001-201ENST00000526704 ECHDC1Q9NTX5 307 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 CCDC39Q9UFE4 941 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 PA2G4Q9UQ80 394 aaKnown RBP14.03□□□□□ -0.16
LINC01001-201ENST00000526704 STX6O43752 255 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 PHF14O94880 888 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 SYT1P21579 422 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 LMTK3Q96Q04 1460 aa14.03□□□□□ -0.16
LINC01001-201ENST00000526704 PRAMEF22A3QJZ6 481 aa14.02□□□□□ -0.16
LINC01001-201ENST00000526704 GIGYF1O75420 1035 aaPredicted RBP14.02□□□□□ -0.16
LINC01001-201ENST00000526704 KSR2Q6VAB6 950 aa14.02□□□□□ -0.16
LINC01001-201ENST00000526704 C9orf78Q9NZ63 289 aaPredicted RBP14.02□□□□□ -0.16
LINC01001-201ENST00000526704 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.02□□□□□ -0.16
LINC01001-201ENST00000526704 F13A1P00488 732 aa14.02□□□□□ -0.17
LINC01001-201ENST00000526704 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
LINC01001-201ENST00000526704 PSME1Q06323 249 aa14.02□□□□□ -0.17
LINC01001-201ENST00000526704 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.17
LINC01001-201ENST00000526704 ADCK5Q3MIX3 580 aa14.02□□□□□ -0.17
LINC01001-201ENST00000526704 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.17
LINC01001-201ENST00000526704 KCNB2Q92953 911 aa14.02□□□□□ -0.17
LINC01001-201ENST00000526704 MCM5P33992 734 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 RUFY2Q8WXA3 655 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 SMC3Q9UQE7 1217 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 AFDNP55196 1824 aaKnown RBP14.01□□□□□ -0.17
LINC01001-201ENST00000526704 C1orf141Q5JVX7 400 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 CCDC183Q5T5S1 534 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 PRPF40BQ6NWY9 871 aaKnown RBP14.01□□□□□ -0.17
LINC01001-201ENST00000526704 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
LINC01001-201ENST00000526704 JAKMIP1Q96N16 626 aaKnown RBP14.01□□□□□ -0.17
LINC01001-201ENST00000526704 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
LINC01001-201ENST00000526704 VPS53Q5VIR6 699 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 KAZALD1Q96I82 304 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14□□□□□ -0.17
LINC01001-201ENST00000526704 MRC1P22897 1456 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 TERF1P54274 439 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 ST3GAL1Q11201 340 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 AACSQ86V21 672 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 ARHGEF25Q86VW2 580 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 CCDC83Q8IWF9 413 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 TM6SF1Q9BZW5 370 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
LINC01001-201ENST00000526704 UTYO14607 1347 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 EVI5LQ96CN4 794 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 PDRG1Q9NUG6 133 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 GJB2P29033 226 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 UBE2HP62256 183 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 NECTIN1Q15223 517 aa13.99□□□□□ -0.17
LINC01001-201ENST00000526704 GRM8O00222 908 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 SASH1O94885 1247 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 GCP02774 474 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 FAM184AQ8NB25 1140 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 BICC1Q9H694 974 aaKnown RBP13.98□□□□□ -0.17
LINC01001-201ENST00000526704 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 FIBPO43427 364 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 DTNBO60941 627 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 LINS1Q8NG48 757 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 SH2B1Q9NRF2 756 aaPredicted RBP13.98□□□□□ -0.17
LINC01001-201ENST00000526704 R3HCC1Q9Y3T6 440 aaKnown RBP13.98□□□□□ -0.17
LINC01001-201ENST00000526704 CYP46A1Q9Y6A2 500 aa13.98□□□□□ -0.17
LINC01001-201ENST00000526704 EAF2Q96CJ1 260 aaPredicted RBP13.97□□□□□ -0.17
LINC01001-201ENST00000526704 FAM227BQ96M60 508 aa13.97□□□□□ -0.17
LINC01001-201ENST00000526704 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
LINC01001-201ENST00000526704 NMIQ13287 307 aaPredicted RBP13.97□□□□□ -0.17
LINC01001-201ENST00000526704 UVSSAQ2YD98 709 aa13.97□□□□□ -0.17
LINC01001-201ENST00000526704 ZSCAN31Q96LW9 406 aaPredicted RBP13.97□□□□□ -0.17
LINC01001-201ENST00000526704 TLR7Q9NYK1 1049 aaKnown RBP13.97□□□□□ -0.17
LINC01001-201ENST00000526704 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms