RNA–Protein interactions for RNA: ENST00000526688.1

FGFR1-228, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-228ENST00000526688 CNTNAP1P78357 1384 aa18.04■□□□□ 0.48
FGFR1-228ENST00000526688 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
FGFR1-228ENST00000526688 PRPF40BQ6NWY9 871 aaKnown RBP18.03■□□□□ 0.48
FGFR1-228ENST00000526688 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
FGFR1-228ENST00000526688 PRDM10Q9NQV6 1147 aa18.03■□□□□ 0.48
FGFR1-228ENST00000526688 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
FGFR1-228ENST00000526688 PASKQ96RG2 1323 aa18.02■□□□□ 0.48
FGFR1-228ENST00000526688 CAMTA2O94983 1202 aa18.02■□□□□ 0.48
FGFR1-228ENST00000526688 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.47
FGFR1-228ENST00000526688 KLRG2A4D1S0 409 aaPredicted RBP18.01■□□□□ 0.47
FGFR1-228ENST00000526688 NPHP1O15259 732 aa18.01■□□□□ 0.47
FGFR1-228ENST00000526688 ZNF652Q9Y2D9 606 aa18.01■□□□□ 0.47
FGFR1-228ENST00000526688 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
FGFR1-228ENST00000526688 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
FGFR1-228ENST00000526688 DDNO94850 711 aaPredicted RBP18■□□□□ 0.47
FGFR1-228ENST00000526688 CCDC93Q567U6 631 aa18■□□□□ 0.47
FGFR1-228ENST00000526688 C7orf43Q8WVR3 580 aa18■□□□□ 0.47
FGFR1-228ENST00000526688 NUP98P52948 1817 aa18■□□□□ 0.47
FGFR1-228ENST00000526688 NPR1P16066 1061 aa17.99■□□□□ 0.47
FGFR1-228ENST00000526688 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
FGFR1-228ENST00000526688 TAF1DQ9H5J8 278 aaPredicted RBP17.99■□□□□ 0.47
FGFR1-228ENST00000526688 A1BGP04217 495 aa17.98■□□□□ 0.47
FGFR1-228ENST00000526688 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
FGFR1-228ENST00000526688 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
FGFR1-228ENST00000526688 MKRN1Q9UHC7 482 aaKnown RBP17.98■□□□□ 0.47
FGFR1-228ENST00000526688 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
FGFR1-228ENST00000526688 TMEM88BA6NKF7 163 aa17.97■□□□□ 0.47
FGFR1-228ENST00000526688 BTBD11A6QL63 1104 aa17.97■□□□□ 0.47
FGFR1-228ENST00000526688 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
FGFR1-228ENST00000526688 FKBP4Q02790 459 aaKnown RBP eCLIP17.97■□□□□ 0.47
FGFR1-228ENST00000526688 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
FGFR1-228ENST00000526688 NBPF5PQ86XG9 351 aaPredicted RBP17.97■□□□□ 0.47
FGFR1-228ENST00000526688 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
FGFR1-228ENST00000526688 ITGBL1O95965 494 aaPredicted RBP17.96■□□□□ 0.47
FGFR1-228ENST00000526688 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
FGFR1-228ENST00000526688 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
FGFR1-228ENST00000526688 THSD7BQ9C0I4 1608 aa17.95■□□□□ 0.46
FGFR1-228ENST00000526688 FOXN1O15353 648 aa17.95■□□□□ 0.46
FGFR1-228ENST00000526688 POTEIP0CG38 1075 aa17.95■□□□□ 0.46
FGFR1-228ENST00000526688 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
FGFR1-228ENST00000526688 ALDH1B1P30837 517 aa17.95■□□□□ 0.46
FGFR1-228ENST00000526688 HACL1Q9UJ83 578 aa17.95■□□□□ 0.46
FGFR1-228ENST00000526688 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
FGFR1-228ENST00000526688 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
FGFR1-228ENST00000526688 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
FGFR1-228ENST00000526688 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
FGFR1-228ENST00000526688 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
FGFR1-228ENST00000526688 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
FGFR1-228ENST00000526688 CC2D2BQ6DHV5 1058 aa17.93■□□□□ 0.46
FGFR1-228ENST00000526688 RIC1Q4ADV7 1423 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 RASSF10A6NK89 507 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 FZD9O00144 591 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
FGFR1-228ENST00000526688 GPC2Q8N158 579 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 PSMD1Q99460 953 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
FGFR1-228ENST00000526688 EPHX2P34913 555 aa17.91■□□□□ 0.46
FGFR1-228ENST00000526688 VEGFBP49765 207 aa17.91■□□□□ 0.46
FGFR1-228ENST00000526688 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
FGFR1-228ENST00000526688 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
FGFR1-228ENST00000526688 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
FGFR1-228ENST00000526688 IARSP41252 1262 aaKnown RBP17.9■□□□□ 0.46
FGFR1-228ENST00000526688 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
FGFR1-228ENST00000526688 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
FGFR1-228ENST00000526688 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
FGFR1-228ENST00000526688 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
FGFR1-228ENST00000526688 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
FGFR1-228ENST00000526688 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
FGFR1-228ENST00000526688 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
FGFR1-228ENST00000526688 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.45
FGFR1-228ENST00000526688 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
FGFR1-228ENST00000526688 KCNQ3O43525 872 aa17.88■□□□□ 0.45
FGFR1-228ENST00000526688 PRKAR2BP31323 418 aa17.88■□□□□ 0.45
FGFR1-228ENST00000526688 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
FGFR1-228ENST00000526688 EAPPQ56P03 285 aaPredicted RBP17.88■□□□□ 0.45
FGFR1-228ENST00000526688 CNTROBQ8N137 903 aa17.88■□□□□ 0.45
FGFR1-228ENST00000526688 JDP2Q8WYK2 163 aa17.88■□□□□ 0.45
FGFR1-228ENST00000526688 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
FGFR1-228ENST00000526688 ZNF277Q9NRM2 450 aaPredicted RBP17.88■□□□□ 0.45
FGFR1-228ENST00000526688 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
FGFR1-228ENST00000526688 ERVV-1B6SEH8 477 aa17.86■□□□□ 0.45
FGFR1-228ENST00000526688 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
FGFR1-228ENST00000526688 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
FGFR1-228ENST00000526688 NBPF26B4DH59 902 aa17.85■□□□□ 0.45
FGFR1-228ENST00000526688 HOXA10P31260 410 aaPredicted RBP17.85■□□□□ 0.45
FGFR1-228ENST00000526688 NBPF10Q6P3W6 841 aaKnown RBP17.85■□□□□ 0.45
FGFR1-228ENST00000526688 NBPF15Q8N660 670 aa17.85■□□□□ 0.45
FGFR1-228ENST00000526688 WDR33Q9C0J8 1336 aaKnown RBP17.85■□□□□ 0.45
FGFR1-228ENST00000526688 ANKRD36CQ5JPF3 1778 aa17.84■□□□□ 0.45
FGFR1-228ENST00000526688 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
FGFR1-228ENST00000526688 GTF2E1P29083 439 aaPredicted RBP17.84■□□□□ 0.45
FGFR1-228ENST00000526688 EIF6P56537 245 aaKnown RBP17.84■□□□□ 0.45
FGFR1-228ENST00000526688 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
FGFR1-228ENST00000526688 VPS33BQ9H267 617 aa17.84■□□□□ 0.45
FGFR1-228ENST00000526688 LMOD1P29536 600 aaPredicted RBP17.83■□□□□ 0.44
FGFR1-228ENST00000526688 ECE1P42892 770 aa17.83■□□□□ 0.44
FGFR1-228ENST00000526688 LBX1P52954 281 aa17.83■□□□□ 0.44
FGFR1-228ENST00000526688 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
FGFR1-228ENST00000526688 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms