RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 LTBP1Q14766 1721 aa9.73□□□□□ -0.85
SSH3-204ENST00000525913 FZD9O00144 591 aa9.72□□□□□ -0.85
SSH3-204ENST00000525913 STYK1Q6J9G0 422 aa9.72□□□□□ -0.85
SSH3-204ENST00000525913 PRPF40BQ6NWY9 871 aaKnown RBP9.72□□□□□ -0.85
SSH3-204ENST00000525913 PNMA8AQ86V59 439 aaPredicted RBP9.72□□□□□ -0.85
SSH3-204ENST00000525913 SLC52A2Q9HAB3 445 aa9.72□□□□□ -0.85
SSH3-204ENST00000525913 ABT1Q9ULW3 272 aaKnown RBP9.72□□□□□ -0.85
SSH3-204ENST00000525913 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
SSH3-204ENST00000525913 C1orf141Q5JVX7 400 aa9.71□□□□□ -0.86
SSH3-204ENST00000525913 RNF123Q5XPI4 1314 aa9.71□□□□□ -0.86
SSH3-204ENST00000525913 AOC2O75106 756 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 MAP2K2P36507 400 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 ECE1P42892 770 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 SOGA3Q5TF21 947 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 OLFM4Q6UX06 510 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 MASTLQ96GX5 879 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 BEGAINQ9BUH8 593 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 ZNF277Q9NRM2 450 aaPredicted RBP9.7□□□□□ -0.86
SSH3-204ENST00000525913 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 UBR2Q8IWV8 1755 aa9.7□□□□□ -0.86
SSH3-204ENST00000525913 TNNT2P45379 298 aaPredicted RBP9.69□□□□□ -0.86
SSH3-204ENST00000525913 FKBP4Q02790 459 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSH3-204ENST00000525913 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
SSH3-204ENST00000525913 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
SSH3-204ENST00000525913 SCN7AQ01118 1682 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 MRC1P22897 1456 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 KLRG2A4D1S0 409 aaPredicted RBP9.68□□□□□ -0.86
SSH3-204ENST00000525913 RNMTO43148 476 aaKnown RBP9.68□□□□□ -0.86
SSH3-204ENST00000525913 DGKZQ13574 1117 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 CCDC93Q567U6 631 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 SULT6B1Q6IMI4 303 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 GPC2Q8N158 579 aa9.68□□□□□ -0.86
SSH3-204ENST00000525913 SNED1Q8TER0 1413 aa9.67□□□□□ -0.86
SSH3-204ENST00000525913 A0A087WZG4 1122 aa9.67□□□□□ -0.86
SSH3-204ENST00000525913 TRAF5O00463 557 aa9.67□□□□□ -0.86
SSH3-204ENST00000525913 GRM1Q13255 1194 aa9.67□□□□□ -0.86
SSH3-204ENST00000525913 SYNE4Q8N205 404 aa9.67□□□□□ -0.86
SSH3-204ENST00000525913 COL4A5P29400 1685 aa9.67□□□□□ -0.86
SSH3-204ENST00000525913 CA12O43570 354 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 CAMTA2O94983 1202 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 IL13P35225 146 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
SSH3-204ENST00000525913 EPS15P42566 896 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 SCNN1DP51172 638 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
SSH3-204ENST00000525913 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
SSH3-204ENST00000525913 SAPCD2Q86UD0 394 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 CNBD1Q8NA66 436 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 ZIC5Q96T25 663 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
SSH3-204ENST00000525913 STARD3NLO95772 234 aa9.65□□□□□ -0.86
SSH3-204ENST00000525913 NPR1P16066 1061 aa9.65□□□□□ -0.86
SSH3-204ENST00000525913 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.86
SSH3-204ENST00000525913 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
SSH3-204ENST00000525913 RTKN2Q8IZC4 609 aa9.65□□□□□ -0.86
SSH3-204ENST00000525913 HHIPL1Q96JK4 782 aa9.65□□□□□ -0.86
SSH3-204ENST00000525913 BCORQ6W2J9 1755 aa9.65□□□□□ -0.87
SSH3-204ENST00000525913 SOX10P56693 466 aa9.64□□□□□ -0.87
SSH3-204ENST00000525913 ST5P78524 1137 aa9.64□□□□□ -0.87
SSH3-204ENST00000525913 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
SSH3-204ENST00000525913 USP50Q70EL3 339 aaPredicted RBP9.64□□□□□ -0.87
SSH3-204ENST00000525913 A1BGP04217 495 aa9.63□□□□□ -0.87
SSH3-204ENST00000525913 ZNF496Q96IT1 587 aaPredicted RBP9.63□□□□□ -0.87
SSH3-204ENST00000525913 PGAP2Q9UHJ9 254 aa9.63□□□□□ -0.87
SSH3-204ENST00000525913 GJA3Q9Y6H8 435 aa9.63□□□□□ -0.87
SSH3-204ENST00000525913 POLR2AP24928 1970 aaKnown RBP9.63□□□□□ -0.87
SSH3-204ENST00000525913 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
SSH3-204ENST00000525913 PSMD1Q99460 953 aa9.62□□□□□ -0.87
SSH3-204ENST00000525913 SIPA1L3O60292 1781 aaPredicted RBP9.62□□□□□ -0.87
SSH3-204ENST00000525913 HEG1Q9ULI3 1381 aa9.62□□□□□ -0.87
SSH3-204ENST00000525913 CELF2O95319 508 aaKnown RBP9.61□□□□□ -0.87
SSH3-204ENST00000525913 CLEC4GQ6UXB4 293 aa9.61□□□□□ -0.87
SSH3-204ENST00000525913 JDP2Q8WYK2 163 aa9.61□□□□□ -0.87
SSH3-204ENST00000525913 TEX13AQ9BXU3 409 aaPredicted RBP9.61□□□□□ -0.87
SSH3-204ENST00000525913 ZNF330Q9Y3S2 320 aaPredicted RBP9.61□□□□□ -0.87
SSH3-204ENST00000525913 AKAP11Q9UKA4 1901 aa9.6□□□□□ -0.87
SSH3-204ENST00000525913 LMOD1P29536 600 aaPredicted RBP9.6□□□□□ -0.87
SSH3-204ENST00000525913 ALDH1B1P30837 517 aa9.6□□□□□ -0.87
SSH3-204ENST00000525913 EIF6P56537 245 aaKnown RBP9.6□□□□□ -0.87
SSH3-204ENST00000525913 ZNF790Q6PG37 636 aa9.6□□□□□ -0.87
SSH3-204ENST00000525913 DZIP3Q86Y13 1208 aaKnown RBP9.6□□□□□ -0.87
SSH3-204ENST00000525913 IL17REQ8NFR9 667 aa9.6□□□□□ -0.87
SSH3-204ENST00000525913 FAM155AB1AL88 458 aaPredicted RBP9.59□□□□□ -0.87
SSH3-204ENST00000525913 NPHP1O15259 732 aa9.59□□□□□ -0.87
SSH3-204ENST00000525913 HIRAP54198 1017 aaPredicted RBP9.59□□□□□ -0.87
SSH3-204ENST00000525913 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
SSH3-204ENST00000525913 SLC51AQ86UW1 340 aa9.59□□□□□ -0.87
SSH3-204ENST00000525913 NBPF5PQ86XG9 351 aaPredicted RBP9.59□□□□□ -0.87
SSH3-204ENST00000525913 GLIS2Q9BZE0 524 aaPredicted RBP9.59□□□□□ -0.87
SSH3-204ENST00000525913 ADARB2Q9NS39 739 aaKnown RBP9.59□□□□□ -0.87
SSH3-204ENST00000525913 GPRC5DQ9NZD1 345 aa9.59□□□□□ -0.87
SSH3-204ENST00000525913 USP16Q9Y5T5 823 aa9.59□□□□□ -0.87
SSH3-204ENST00000525913 MKI67P46013 3256 aaKnown RBP9.59□□□□□ -0.87
SSH3-204ENST00000525913 KCNQ3O43525 872 aa9.58□□□□□ -0.88
SSH3-204ENST00000525913 HMOX1P09601 288 aa9.58□□□□□ -0.88
SSH3-204ENST00000525913 PIP4K2AP48426 406 aaPredicted RBP9.58□□□□□ -0.88
SSH3-204ENST00000525913 NOGQ13253 232 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms