RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 CASZ1Q86V15 1759 aa17.93■□□□□ 0.46
UBXN1-205ENST00000525004 MAP3K15Q6ZN16 1313 aa17.93■□□□□ 0.46
UBXN1-205ENST00000525004 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
UBXN1-205ENST00000525004 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
UBXN1-205ENST00000525004 ARFGEF2Q9Y6D5 1785 aa17.92■□□□□ 0.46
UBXN1-205ENST00000525004 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
UBXN1-205ENST00000525004 BCL2L12Q9HB09 334 aa17.92■□□□□ 0.46
UBXN1-205ENST00000525004 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
UBXN1-205ENST00000525004 PHF14O94880 888 aa17.91■□□□□ 0.46
UBXN1-205ENST00000525004 AIMP1Q12904 312 aaKnown RBP17.91■□□□□ 0.46
UBXN1-205ENST00000525004 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
UBXN1-205ENST00000525004 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
UBXN1-205ENST00000525004 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
UBXN1-205ENST00000525004 ADCY9O60503 1353 aa17.91■□□□□ 0.46
UBXN1-205ENST00000525004 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
UBXN1-205ENST00000525004 PI4KAP2A4QPH2 592 aa17.9■□□□□ 0.46
UBXN1-205ENST00000525004 ZPR1O75312 459 aa17.9■□□□□ 0.46
UBXN1-205ENST00000525004 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
UBXN1-205ENST00000525004 GIGYF2Q6Y7W6 1299 aaKnown RBP17.9■□□□□ 0.46
UBXN1-205ENST00000525004 KIF6Q6ZMV9 814 aa17.9■□□□□ 0.46
UBXN1-205ENST00000525004 PI4KAP1Q8N8J0 262 aa17.9■□□□□ 0.46
UBXN1-205ENST00000525004 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
UBXN1-205ENST00000525004 GYS1P13807 737 aa17.89■□□□□ 0.45
UBXN1-205ENST00000525004 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
UBXN1-205ENST00000525004 HLFQ16534 295 aa17.89■□□□□ 0.45
UBXN1-205ENST00000525004 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
UBXN1-205ENST00000525004 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
UBXN1-205ENST00000525004 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
UBXN1-205ENST00000525004 R3HDM1Q15032 1099 aaKnown RBP17.88■□□□□ 0.45
UBXN1-205ENST00000525004 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
UBXN1-205ENST00000525004 N4BP2Q86UW6 1770 aaPredicted RBP17.87■□□□□ 0.45
UBXN1-205ENST00000525004 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
UBXN1-205ENST00000525004 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 ATF7IPQ6VMQ6 1270 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 RIC3Q7Z5B4 369 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 NLGN1Q8N2Q7 840 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 DNAAF4Q8WXU2 420 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
UBXN1-205ENST00000525004 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
UBXN1-205ENST00000525004 ZBTB3Q9H5J0 574 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
UBXN1-205ENST00000525004 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
UBXN1-205ENST00000525004 TRIM27P14373 513 aa17.86■□□□□ 0.45
UBXN1-205ENST00000525004 TM4SF1P30408 202 aa17.86■□□□□ 0.45
UBXN1-205ENST00000525004 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
UBXN1-205ENST00000525004 ZKSCAN2Q63HK3 967 aa17.86■□□□□ 0.45
UBXN1-205ENST00000525004 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
UBXN1-205ENST00000525004 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
UBXN1-205ENST00000525004 FKBP8Q14318 412 aa17.85■□□□□ 0.45
UBXN1-205ENST00000525004 ARXQ96QS3 562 aa17.85■□□□□ 0.45
UBXN1-205ENST00000525004 PXDNLA1KZ92 1463 aa17.84■□□□□ 0.45
UBXN1-205ENST00000525004 F6X3S4 739 aa17.84■□□□□ 0.45
UBXN1-205ENST00000525004 ABCC4O15439 1325 aa17.83■□□□□ 0.44
UBXN1-205ENST00000525004 BEND3Q5T5X7 828 aa17.83■□□□□ 0.44
UBXN1-205ENST00000525004 TBC1D9BQ66K14 1250 aa17.83■□□□□ 0.44
UBXN1-205ENST00000525004 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.44
UBXN1-205ENST00000525004 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
UBXN1-205ENST00000525004 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
UBXN1-205ENST00000525004 MSH5O43196 834 aa17.82■□□□□ 0.44
UBXN1-205ENST00000525004 IGKV5-2P06315 115 aa17.82■□□□□ 0.44
UBXN1-205ENST00000525004 NFIXQ14938 502 aa17.82■□□□□ 0.44
UBXN1-205ENST00000525004 INTS3Q68E01 1043 aaKnown RBP17.82■□□□□ 0.44
UBXN1-205ENST00000525004 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.82■□□□□ 0.44
UBXN1-205ENST00000525004 LINS1Q8NG48 757 aa17.82■□□□□ 0.44
UBXN1-205ENST00000525004 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
UBXN1-205ENST00000525004 NRXN2Q9P2S2 1712 aa17.81■□□□□ 0.44
UBXN1-205ENST00000525004 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
UBXN1-205ENST00000525004 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
UBXN1-205ENST00000525004 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
UBXN1-205ENST00000525004 UBN2Q6ZU65 1347 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 NEURL1BA8MQ27 555 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 MS4A1P11836 297 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
UBXN1-205ENST00000525004 NEXNQ0ZGT2 675 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 MYD88Q99836 296 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 SGIP1Q9BQI5 828 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
UBXN1-205ENST00000525004 NIP7Q9Y221 180 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBXN1-205ENST00000525004 PLIN1O60240 522 aa17.79■□□□□ 0.44
UBXN1-205ENST00000525004 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
UBXN1-205ENST00000525004 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
UBXN1-205ENST00000525004 SETDB2Q96T68 719 aa17.79■□□□□ 0.44
UBXN1-205ENST00000525004 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
UBXN1-205ENST00000525004 POLRMTO00411 1230 aaKnown RBP17.78■□□□□ 0.44
UBXN1-205ENST00000525004 RLBP1P12271 317 aa17.78■□□□□ 0.44
UBXN1-205ENST00000525004 DDR1Q08345 913 aa17.78■□□□□ 0.44
UBXN1-205ENST00000525004 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
UBXN1-205ENST00000525004 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
UBXN1-205ENST00000525004 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
UBXN1-205ENST00000525004 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
UBXN1-205ENST00000525004 GPTP24298 496 aa17.77■□□□□ 0.44
UBXN1-205ENST00000525004 GCKRQ14397 625 aa17.77■□□□□ 0.44
UBXN1-205ENST00000525004 SUSD4Q5VX71 490 aa17.77■□□□□ 0.44
UBXN1-205ENST00000525004 SLC4A10Q6U841 1118 aa17.77■□□□□ 0.44
UBXN1-205ENST00000525004 UTYO14607 1347 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms