RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 VEGFAP15692 232 aaPredicted RBP8.64□□□□□ -1.03
NUP98-213ENST00000524563 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 DPY19L2Q6NUT2 758 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
NUP98-213ENST00000524563 ZNF496Q96IT1 587 aaPredicted RBP8.64□□□□□ -1.03
NUP98-213ENST00000524563 TEX13AQ9BXU3 409 aaPredicted RBP8.64□□□□□ -1.03
NUP98-213ENST00000524563 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
NUP98-213ENST00000524563 LAMB2P55268 1798 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 GLTPD2A6NH11 291 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 SOGA3Q5TF21 947 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 ZNF790Q6PG37 636 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 NBPF5PQ86XG9 351 aaPredicted RBP8.63□□□□□ -1.03
NUP98-213ENST00000524563 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
NUP98-213ENST00000524563 PLEKHF1Q96S99 279 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 SETDB2Q96T68 719 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 BCL2L12Q9HB09 334 aa8.63□□□□□ -1.03
NUP98-213ENST00000524563 CEMIPQ8WUJ3 1361 aa8.62□□□□□ -1.03
NUP98-213ENST00000524563 NFKBIEO00221 500 aa8.62□□□□□ -1.03
NUP98-213ENST00000524563 IL6STP40189 918 aaPredicted RBP8.62□□□□□ -1.03
NUP98-213ENST00000524563 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
NUP98-213ENST00000524563 CCDC184Q52MB2 194 aa8.62□□□□□ -1.03
NUP98-213ENST00000524563 PRR5LQ6MZQ0 368 aa8.62□□□□□ -1.03
NUP98-213ENST00000524563 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
NUP98-213ENST00000524563 CNKSR1Q969H4 720 aa8.62□□□□□ -1.03
NUP98-213ENST00000524563 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
NUP98-213ENST00000524563 ANP32CO43423 234 aa8.61□□□□□ -1.03
NUP98-213ENST00000524563 HSPA1AP0DMV8 641 aaKnown RBP8.61□□□□□ -1.03
NUP98-213ENST00000524563 HSPA1BP0DMV9 641 aaKnown RBP8.61□□□□□ -1.03
NUP98-213ENST00000524563 GTF2E1P29083 439 aaPredicted RBP8.61□□□□□ -1.03
NUP98-213ENST00000524563 PIP4K2AP48426 406 aaPredicted RBP8.61□□□□□ -1.03
NUP98-213ENST00000524563 CCDC93Q567U6 631 aa8.61□□□□□ -1.03
NUP98-213ENST00000524563 PPP4R3CPQ6ZMV5 832 aa8.61□□□□□ -1.03
NUP98-213ENST00000524563 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
NUP98-213ENST00000524563 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 A1BGP04217 495 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 DNAJC5GQ8N7S2 189 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 IL17REQ8NFR9 667 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 MASTLQ96GX5 879 aa8.6□□□□□ -1.03
NUP98-213ENST00000524563 DDX60Q8IY21 1712 aaKnown RBP8.6□□□□□ -1.03
NUP98-213ENST00000524563 MAPK8IP3Q9UPT6 1336 aa8.59□□□□□ -1.03
NUP98-213ENST00000524563 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.03
NUP98-213ENST00000524563 EAPPQ56P03 285 aaPredicted RBP8.59□□□□□ -1.03
NUP98-213ENST00000524563 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
NUP98-213ENST00000524563 JMYQ8N9B5 988 aa8.59□□□□□ -1.03
NUP98-213ENST00000524563 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
NUP98-213ENST00000524563 LTBP3Q9NS15 1303 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 KCNQ3O43525 872 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 SNRPA1P09661 255 aaKnown RBP8.58□□□□□ -1.04
NUP98-213ENST00000524563 PRELPP51888 382 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 DCTN1Q14203 1278 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
NUP98-213ENST00000524563 CHADLQ6NUI6 762 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 MCM10Q7L590 875 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
NUP98-213ENST00000524563 ADAMTS8Q9UP79 889 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
NUP98-213ENST00000524563 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 ADAMTSL1Q8N6G6 1762 aa8.58□□□□□ -1.04
NUP98-213ENST00000524563 TAF1P21675 1872 aa8.57□□□□□ -1.04
NUP98-213ENST00000524563 DDNO94850 711 aaPredicted RBP8.57□□□□□ -1.04
NUP98-213ENST00000524563 SRGNP10124 158 aa8.57□□□□□ -1.04
NUP98-213ENST00000524563 NPR1P16066 1061 aa8.57□□□□□ -1.04
NUP98-213ENST00000524563 PAXIP1Q6ZW49 1069 aaPredicted RBP8.57□□□□□ -1.04
NUP98-213ENST00000524563 NGEFQ8N5V2 710 aa8.57□□□□□ -1.04
NUP98-213ENST00000524563 RPGRQ92834 1020 aaKnown RBP8.57□□□□□ -1.04
NUP98-213ENST00000524563 PNNQ9H307 717 aaKnown RBP8.57□□□□□ -1.04
NUP98-213ENST00000524563 ZNF277Q9NRM2 450 aaPredicted RBP8.57□□□□□ -1.04
NUP98-213ENST00000524563 SPEF2Q9C093 1822 aa8.57□□□□□ -1.04
NUP98-213ENST00000524563 PRAMEF22A3QJZ6 481 aa8.56□□□□□ -1.04
NUP98-213ENST00000524563 HTATSF1O43719 755 aaKnown RBP8.56□□□□□ -1.04
NUP98-213ENST00000524563 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
NUP98-213ENST00000524563 FKBP4Q02790 459 aaKnown RBP eCLIP8.56□□□□□ -1.04
NUP98-213ENST00000524563 LDHDQ86WU2 507 aa8.56□□□□□ -1.04
NUP98-213ENST00000524563 RUNDC1Q96C34 613 aa8.56□□□□□ -1.04
NUP98-213ENST00000524563 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
NUP98-213ENST00000524563 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
NUP98-213ENST00000524563 RRP7AQ9Y3A4 280 aaKnown RBP8.56□□□□□ -1.04
NUP98-213ENST00000524563 ABCC12Q96J65 1359 aa8.56□□□□□ -1.04
NUP98-213ENST00000524563 ZNF541Q9H0D2 1346 aa8.55□□□□□ -1.04
NUP98-213ENST00000524563 AKAP11Q9UKA4 1901 aa8.55□□□□□ -1.04
NUP98-213ENST00000524563 TMPOP42166 694 aaKnown RBP8.55□□□□□ -1.04
NUP98-213ENST00000524563 TPTE2Q6XPS3 522 aa8.55□□□□□ -1.04
NUP98-213ENST00000524563 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
NUP98-213ENST00000524563 THUMPD2Q9BTF0 503 aaKnown RBP8.55□□□□□ -1.04
NUP98-213ENST00000524563 NYXQ9GZU5 481 aa8.55□□□□□ -1.04
NUP98-213ENST00000524563 TMX4Q9H1E5 349 aaPredicted RBP8.55□□□□□ -1.04
NUP98-213ENST00000524563 HACL1Q9UJ83 578 aa8.55□□□□□ -1.04
NUP98-213ENST00000524563 USP16Q9Y5T5 823 aa8.55□□□□□ -1.04
NUP98-213ENST00000524563 POLR2AP24928 1970 aaKnown RBP8.55□□□□□ -1.04
NUP98-213ENST00000524563 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 THSD7BQ9C0I4 1608 aa8.54□□□□□ -1.04
NUP98-213ENST00000524563 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms