RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 INTS5Q6P9B9 1019 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 WWC3Q9ULE0 1092 aa11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
CTNNA1-242ENST00000524292 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 SRP68Q9UHB9 627 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 VIRMAQ69YN4 1812 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 KIF13BQ9NQT8 1826 aa11.36□□□□□ -0.59
CTNNA1-242ENST00000524292 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 STARD3NLO95772 234 aa11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 PPP2R1AP30153 589 aa11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 C1QTNF8P60827 252 aa11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 COL15A1P39059 1388 aa11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
CTNNA1-242ENST00000524292 A0A0G2JLW4 131 aa11.34□□□□□ -0.59
CTNNA1-242ENST00000524292 G3V3G9 751 aa11.34□□□□□ -0.59
CTNNA1-242ENST00000524292 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
CTNNA1-242ENST00000524292 BCS1LQ9Y276 419 aa11.34□□□□□ -0.59
CTNNA1-242ENST00000524292 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.59
CTNNA1-242ENST00000524292 DPEP1P16444 411 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 USPL1Q5W0Q7 1092 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 NARFQ9UHQ1 456 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
CTNNA1-242ENST00000524292 ADCY9O60503 1353 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 CEMIPQ8WUJ3 1361 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 A0A087WZG4 1122 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 FCHSD2O94868 740 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 NEFMP07197 916 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 CANXP27824 592 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 DDR1Q08345 913 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 FMNL2Q96PY5 1086 aa11.32□□□□□ -0.6
CTNNA1-242ENST00000524292 HEG1Q9ULI3 1381 aa11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 BTBD11A6QL63 1104 aa11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 POLRMTO00411 1230 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 ZNF496Q96IT1 587 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
CTNNA1-242ENST00000524292 TM4SF1P30408 202 aa11.3□□□□□ -0.6
CTNNA1-242ENST00000524292 DALRD3Q5D0E6 543 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-242ENST00000524292 ARHGAP27Q6ZUM4 889 aa11.3□□□□□ -0.6
CTNNA1-242ENST00000524292 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-242ENST00000524292 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-242ENST00000524292 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-242ENST00000524292 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
CTNNA1-242ENST00000524292 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-242ENST00000524292 NFIXQ14938 502 aa11.29□□□□□ -0.6
CTNNA1-242ENST00000524292 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-242ENST00000524292 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-242ENST00000524292 MCM10Q7L590 875 aa11.28□□□□□ -0.6
CTNNA1-242ENST00000524292 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.6
CTNNA1-242ENST00000524292 SERPINB2P05120 415 aa11.27□□□□□ -0.61
CTNNA1-242ENST00000524292 KCNA3P22001 575 aa11.27□□□□□ -0.61
CTNNA1-242ENST00000524292 CHRNA5P30532 468 aa11.27□□□□□ -0.61
CTNNA1-242ENST00000524292 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-242ENST00000524292 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-242ENST00000524292 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
CTNNA1-242ENST00000524292 ARFGEF1Q9Y6D6 1849 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 NPHP1O15259 732 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 SLAIN1Q8ND83 568 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 SCN7AQ01118 1682 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 CARMIL3Q8ND23 1372 aa11.26□□□□□ -0.61
CTNNA1-242ENST00000524292 KCNQ3O43525 872 aa11.25□□□□□ -0.61
CTNNA1-242ENST00000524292 A1BGP04217 495 aa11.25□□□□□ -0.61
CTNNA1-242ENST00000524292 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-242ENST00000524292 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
CTNNA1-242ENST00000524292 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
CTNNA1-242ENST00000524292 MAPK8IP3Q9UPT6 1336 aa11.25□□□□□ -0.61
CTNNA1-242ENST00000524292 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 H0YIN7 160 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 C9orf131Q5VYM1 1079 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
CTNNA1-242ENST00000524292 PDE6BP35913 854 aa11.23□□□□□ -0.61
CTNNA1-242ENST00000524292 RALBP1Q15311 655 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms