RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 SRGNP10124 158 aa15.68■□□□□ 0.1
SPARC-206ENST00000524277 C21orf2O43822 256 aa15.67■□□□□ 0.1
SPARC-206ENST00000524277 DCTN1Q14203 1278 aa15.67■□□□□ 0.1
SPARC-206ENST00000524277 DNAJC5GQ8N7S2 189 aa15.67■□□□□ 0.1
SPARC-206ENST00000524277 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
SPARC-206ENST00000524277 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
SPARC-206ENST00000524277 NFE2L2Q16236 605 aa15.66■□□□□ 0.1
SPARC-206ENST00000524277 PLEKHF1Q96S99 279 aa15.66■□□□□ 0.1
SPARC-206ENST00000524277 TNRC6CQ9HCJ0 1690 aaKnown RBP15.66■□□□□ 0.1
SPARC-206ENST00000524277 NBPF26B4DH59 902 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 NPR1P16066 1061 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 ERFEQ4G0M1 354 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 IFFO2Q5TF58 517 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 NBPF10Q6P3W6 841 aaKnown RBP15.65■□□□□ 0.1
SPARC-206ENST00000524277 NBPF15Q8N660 670 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 TAOK3Q9H2K8 898 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 NIP7Q9Y221 180 aaKnown RBP eCLIP15.65■□□□□ 0.1
SPARC-206ENST00000524277 MAPK8IP3Q9UPT6 1336 aa15.65■□□□□ 0.1
SPARC-206ENST00000524277 ERVV-1B6SEH8 477 aa15.64■□□□□ 0.09
SPARC-206ENST00000524277 PIP4K2AP48426 406 aaPredicted RBP15.64■□□□□ 0.09
SPARC-206ENST00000524277 PRELPP51888 382 aa15.64■□□□□ 0.09
SPARC-206ENST00000524277 RALBP1Q15311 655 aa15.64■□□□□ 0.09
SPARC-206ENST00000524277 PRPF40BQ6NWY9 871 aaKnown RBP15.64■□□□□ 0.09
SPARC-206ENST00000524277 CCDC24Q8N4L8 307 aa15.64■□□□□ 0.09
SPARC-206ENST00000524277 ANKRD31Q8N7Z5 1873 aa15.63■□□□□ 0.09
SPARC-206ENST00000524277 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
SPARC-206ENST00000524277 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
SPARC-206ENST00000524277 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
SPARC-206ENST00000524277 NYXQ9GZU5 481 aa15.63■□□□□ 0.09
SPARC-206ENST00000524277 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
SPARC-206ENST00000524277 CCDC93Q567U6 631 aa15.62■□□□□ 0.09
SPARC-206ENST00000524277 KLRG1Q96E93 195 aa15.62■□□□□ 0.09
SPARC-206ENST00000524277 BABAM1Q9NWV8 329 aa15.62■□□□□ 0.09
SPARC-206ENST00000524277 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
SPARC-206ENST00000524277 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
SPARC-206ENST00000524277 ERBB4Q15303 1308 aa15.62■□□□□ 0.09
SPARC-206ENST00000524277 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
SPARC-206ENST00000524277 C7orf43Q8WVR3 580 aa15.61■□□□□ 0.09
SPARC-206ENST00000524277 LMOD3Q0VAK6 560 aa15.6■□□□□ 0.09
SPARC-206ENST00000524277 KIF6Q6ZMV9 814 aa15.6■□□□□ 0.09
SPARC-206ENST00000524277 MAP3K15Q6ZN16 1313 aa15.6■□□□□ 0.09
SPARC-206ENST00000524277 FER1L6Q2WGJ9 1857 aa15.59■□□□□ 0.09
SPARC-206ENST00000524277 HLFQ16534 295 aa15.59■□□□□ 0.09
SPARC-206ENST00000524277 GRIPAP1Q4V328 841 aa15.59■□□□□ 0.09
SPARC-206ENST00000524277 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
SPARC-206ENST00000524277 WDR90Q96KV7 1748 aa15.58■□□□□ 0.08
SPARC-206ENST00000524277 IQCA1LA6NCM1 817 aa15.58■□□□□ 0.08
SPARC-206ENST00000524277 POTECB2RU33 542 aa15.58■□□□□ 0.08
SPARC-206ENST00000524277 FKBP4Q02790 459 aaKnown RBP eCLIP15.58■□□□□ 0.08
SPARC-206ENST00000524277 CC2D2BQ6DHV5 1058 aa15.58■□□□□ 0.08
SPARC-206ENST00000524277 RRP7AQ9Y3A4 280 aaKnown RBP15.58■□□□□ 0.08
SPARC-206ENST00000524277 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
SPARC-206ENST00000524277 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
SPARC-206ENST00000524277 SLX4Q8IY92 1834 aa15.57■□□□□ 0.08
SPARC-206ENST00000524277 DICER1Q9UPY3 1922 aaKnown RBP15.57■□□□□ 0.08
SPARC-206ENST00000524277 RIPK4P57078 832 aa15.57■□□□□ 0.08
SPARC-206ENST00000524277 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
SPARC-206ENST00000524277 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
SPARC-206ENST00000524277 TIAM2Q8IVF5 1701 aa15.57■□□□□ 0.08
SPARC-206ENST00000524277 FAM177BA6PVY3 158 aa15.56■□□□□ 0.08
SPARC-206ENST00000524277 CRY2Q49AN0 593 aa15.56■□□□□ 0.08
SPARC-206ENST00000524277 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
SPARC-206ENST00000524277 ARFGEF2Q9Y6D5 1785 aa15.56■□□□□ 0.08
SPARC-206ENST00000524277 LAMB4A4D0S4 1761 aa15.55■□□□□ 0.08
SPARC-206ENST00000524277 KDM3BQ7LBC6 1761 aa15.55■□□□□ 0.08
SPARC-206ENST00000524277 MYL6BP14649 208 aa15.55■□□□□ 0.08
SPARC-206ENST00000524277 PARP10Q53GL7 1025 aa15.55■□□□□ 0.08
SPARC-206ENST00000524277 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
SPARC-206ENST00000524277 PPP1R42Q7Z4L9 355 aa15.55■□□□□ 0.08
SPARC-206ENST00000524277 L3MBTL3Q96JM7 780 aaPredicted RBP15.55■□□□□ 0.08
SPARC-206ENST00000524277 DLG5Q8TDM6 1919 aa15.55■□□□□ 0.08
SPARC-206ENST00000524277 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
SPARC-206ENST00000524277 DDNO94850 711 aaPredicted RBP15.54■□□□□ 0.08
SPARC-206ENST00000524277 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
SPARC-206ENST00000524277 CHADLQ6NUI6 762 aa15.54■□□□□ 0.08
SPARC-206ENST00000524277 TTLL7Q6ZT98 887 aa15.54■□□□□ 0.08
SPARC-206ENST00000524277 ZNF34Q8IZ26 560 aa15.54■□□□□ 0.08
SPARC-206ENST00000524277 PSMD1Q99460 953 aa15.54■□□□□ 0.08
SPARC-206ENST00000524277 THUMPD2Q9BTF0 503 aaKnown RBP15.54■□□□□ 0.08
SPARC-206ENST00000524277 MYBBP1AQ9BQG0 1328 aaKnown RBP15.53■□□□□ 0.08
SPARC-206ENST00000524277 TMPOP42166 694 aaKnown RBP15.53■□□□□ 0.08
SPARC-206ENST00000524277 RPGRQ92834 1020 aaKnown RBP15.53■□□□□ 0.08
SPARC-206ENST00000524277 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
SPARC-206ENST00000524277 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
SPARC-206ENST00000524277 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
SPARC-206ENST00000524277 HTRA3P83110 453 aa15.52■□□□□ 0.08
SPARC-206ENST00000524277 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
SPARC-206ENST00000524277 JDP2Q8WYK2 163 aa15.52■□□□□ 0.08
SPARC-206ENST00000524277 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
SPARC-206ENST00000524277 ZBTB3Q9H5J0 574 aa15.52■□□□□ 0.08
SPARC-206ENST00000524277 FZD9O00144 591 aa15.51■□□□□ 0.07
SPARC-206ENST00000524277 HSP90AB3PQ58FF7 597 aa15.51■□□□□ 0.07
SPARC-206ENST00000524277 SUSD4Q5VX71 490 aa15.51■□□□□ 0.07
SPARC-206ENST00000524277 LDHDQ86WU2 507 aa15.51■□□□□ 0.07
SPARC-206ENST00000524277 NUTM1Q86Y26 1132 aa15.51■□□□□ 0.07
SPARC-206ENST00000524277 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
SPARC-206ENST00000524277 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
SPARC-206ENST00000524277 ZNF277Q9NRM2 450 aaPredicted RBP15.51■□□□□ 0.07
SPARC-206ENST00000524277 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
SPARC-206ENST00000524277 GPTP24298 496 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms