RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 TMEM87AQ8NBN3 555 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 LMO7Q8WWI1 1683 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 OFD1O75665 1012 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 IFIT2P09913 472 aaKnown RBP21.53■■□□□ 1.04
IKBKB-228ENST00000523517 RNF214Q8ND24 703 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 GPATCH3Q96I76 525 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.53■■□□□ 1.04
IKBKB-228ENST00000523517 PXDNQ92626 1479 aa21.53■■□□□ 1.04
IKBKB-228ENST00000523517 OVOS2A0A0G2JMS6 1433 aa21.52■■□□□ 1.04
IKBKB-228ENST00000523517 PHF14O94880 888 aa21.52■■□□□ 1.04
IKBKB-228ENST00000523517 ZSCAN22P10073 491 aaPredicted RBP21.52■■□□□ 1.04
IKBKB-228ENST00000523517 PA2G4Q9UQ80 394 aaKnown RBP21.52■■□□□ 1.04
IKBKB-228ENST00000523517 CWF19L2Q2TBE0 894 aaKnown RBP21.52■■□□□ 1.04
IKBKB-228ENST00000523517 LARP6Q9BRS8 491 aaKnown RBP21.52■■□□□ 1.04
IKBKB-228ENST00000523517 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.52■■□□□ 1.04
IKBKB-228ENST00000523517 CASTP20810 708 aaKnown RBP21.51■■□□□ 1.03
IKBKB-228ENST00000523517 PTH1RQ03431 593 aa21.51■■□□□ 1.03
IKBKB-228ENST00000523517 CRYBG1Q9Y4K1 1723 aa21.51■■□□□ 1.03
IKBKB-228ENST00000523517 PRAMEF22A3QJZ6 481 aa21.51■■□□□ 1.03
IKBKB-228ENST00000523517 ANKRD24Q8TF21 1146 aa21.51■■□□□ 1.03
IKBKB-228ENST00000523517 HYPKQ9NX55 129 aa21.51■■□□□ 1.03
IKBKB-228ENST00000523517 PHRF1Q9P1Y6 1649 aaKnown RBP21.5■■□□□ 1.03
IKBKB-228ENST00000523517 STX6O43752 255 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 CPA1P15085 419 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 SYT1P21579 422 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 EVI5LQ96CN4 794 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 SMC3Q9UQE7 1217 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 ZNF500O60304 480 aaPredicted RBP21.5■■□□□ 1.03
IKBKB-228ENST00000523517 TPM2P07951 284 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 LINS1Q8NG48 757 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 KCNB2Q92953 911 aa21.5■■□□□ 1.03
IKBKB-228ENST00000523517 AACSQ86V21 672 aa21.49■■□□□ 1.03
IKBKB-228ENST00000523517 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
IKBKB-228ENST00000523517 VPS53Q5VIR6 699 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 PRPF40BQ6NWY9 871 aaKnown RBP21.48■■□□□ 1.03
IKBKB-228ENST00000523517 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.48■■□□□ 1.03
IKBKB-228ENST00000523517 TM6SF1Q9BZW5 370 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 PDRG1Q9NUG6 133 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 GRM8O00222 908 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 JAKMIP1Q96N16 626 aaKnown RBP21.48■■□□□ 1.03
IKBKB-228ENST00000523517 ZSWIM6Q9HCJ5 1215 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 CCDC39Q9UFE4 941 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 ZKSCAN5Q9Y2L8 839 aa21.48■■□□□ 1.03
IKBKB-228ENST00000523517 UTYO14607 1347 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 LARGE1O95461 756 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 XPCQ01831 940 aaPredicted RBP21.47■■□□□ 1.03
IKBKB-228ENST00000523517 ADCK5Q3MIX3 580 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 KAZALD1Q96I82 304 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 ORAI2Q96SN7 254 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
IKBKB-228ENST00000523517 DDX58O95786 925 aaKnown RBP21.47■■□□□ 1.03
IKBKB-228ENST00000523517 MCM5P33992 734 aa21.47■■□□□ 1.03
IKBKB-228ENST00000523517 F13A1P00488 732 aa21.46■■□□□ 1.03
IKBKB-228ENST00000523517 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.031e-7■■■■■ 31
IKBKB-228ENST00000523517 CYP46A1Q9Y6A2 500 aa21.46■■□□□ 1.03
IKBKB-228ENST00000523517 SASH1O94885 1247 aa21.46■■□□□ 1.03
IKBKB-228ENST00000523517 NECTIN1Q15223 517 aa21.46■■□□□ 1.03
IKBKB-228ENST00000523517 CCDC183Q5T5S1 534 aa21.46■■□□□ 1.03
IKBKB-228ENST00000523517 ZSCAN31Q96LW9 406 aaPredicted RBP21.46■■□□□ 1.03
IKBKB-228ENST00000523517 G3BP1Q13283 466 aaKnown RBP eCLIP21.45■■□□□ 1.021e-8■■■■■ 32.6
IKBKB-228ENST00000523517 CCDC83Q8IWF9 413 aa21.45■■□□□ 1.02
IKBKB-228ENST00000523517 BICC1Q9H694 974 aaKnown RBP21.45■■□□□ 1.02
IKBKB-228ENST00000523517 SH2B1Q9NRF2 756 aaPredicted RBP21.45■■□□□ 1.02
IKBKB-228ENST00000523517 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
IKBKB-228ENST00000523517 RGPD2P0DJD1 1756 aa21.45■■□□□ 1.02
IKBKB-228ENST00000523517 SLIT3O75094 1523 aa21.45■■□□□ 1.02
IKBKB-228ENST00000523517 CCDC171Q6TFL3 1326 aa21.45■■□□□ 1.02
IKBKB-228ENST00000523517 UBE2HP62256 183 aa21.45■■□□□ 1.02
IKBKB-228ENST00000523517 EAF2Q96CJ1 260 aaPredicted RBP21.45■■□□□ 1.02
IKBKB-228ENST00000523517 PDIA6Q15084 440 aa21.44■■□□□ 1.02
IKBKB-228ENST00000523517 LMOD2Q6P5Q4 547 aa21.44■■□□□ 1.02
IKBKB-228ENST00000523517 AXIN2Q9Y2T1 843 aa21.44■■□□□ 1.02
IKBKB-228ENST00000523517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.44■■□□□ 1.02
IKBKB-228ENST00000523517 HIP1O00291 1037 aa21.44■■□□□ 1.02
IKBKB-228ENST00000523517 AIMP1Q12904 312 aaKnown RBP21.44■■□□□ 1.02
IKBKB-228ENST00000523517 ZKSCAN1P17029 563 aaPredicted RBP21.43■■□□□ 1.02
IKBKB-228ENST00000523517 GJB2P29033 226 aa21.43■■□□□ 1.02
IKBKB-228ENST00000523517 FAM184AQ8NB25 1140 aa21.43■■□□□ 1.02
IKBKB-228ENST00000523517 PRKCSHP14314 528 aaPredicted RBP21.43■■□□□ 1.02
IKBKB-228ENST00000523517 RBM8AQ9Y5S9 174 aaKnown RBP21.43■■□□□ 1.02
IKBKB-228ENST00000523517 LETM1O95202 739 aaPredicted RBP21.42■■□□□ 1.02
IKBKB-228ENST00000523517 NMIQ13287 307 aaPredicted RBP21.42■■□□□ 1.02
IKBKB-228ENST00000523517 UVSSAQ2YD98 709 aa21.42■■□□□ 1.02
IKBKB-228ENST00000523517 CREB3L3Q68CJ9 461 aa21.42■■□□□ 1.02
IKBKB-228ENST00000523517 FAM227BQ96M60 508 aa21.42■■□□□ 1.02
IKBKB-228ENST00000523517 CCDC8Q9H0W5 538 aaPredicted RBP21.42■■□□□ 1.02
IKBKB-228ENST00000523517 MTMR6Q9Y217 621 aa21.42■■□□□ 1.02
IKBKB-228ENST00000523517 RRP9O43818 475 aaKnown RBP21.41■■□□□ 1.02
IKBKB-228ENST00000523517 MAP4K1Q92918 833 aa21.41■■□□□ 1.02
IKBKB-228ENST00000523517 SNRKQ9NRH2 765 aa21.41■■□□□ 1.02
IKBKB-228ENST00000523517 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
IKBKB-228ENST00000523517 TERF1P54274 439 aa21.41■■□□□ 1.02
IKBKB-228ENST00000523517 FIBPO43427 364 aa21.4■■□□□ 1.02
IKBKB-228ENST00000523517 ST3GAL1Q11201 340 aa21.4■■□□□ 1.02
IKBKB-228ENST00000523517 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
IKBKB-228ENST00000523517 KCNJ4P48050 445 aa21.4■■□□□ 1.02
IKBKB-228ENST00000523517 HSP90AA2PQ14568 343 aaPredicted RBP21.4■■□□□ 1.02
IKBKB-228ENST00000523517 ME3Q16798 604 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms