RNA–Protein interactions for RNA: ENST00000523388.5

PTK2-243, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2

Gene PTK2, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-243ENST00000523388 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
PTK2-243ENST00000523388 LTBP3Q9NS15 1303 aa13.18□□□□□ -0.3
PTK2-243ENST00000523388 SRGNP10124 158 aa13.18□□□□□ -0.3
PTK2-243ENST00000523388 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
PTK2-243ENST00000523388 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
PTK2-243ENST00000523388 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
PTK2-243ENST00000523388 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
PTK2-243ENST00000523388 SBF1O95248 1867 aa13.17□□□□□ -0.3
PTK2-243ENST00000523388 PRELPP51888 382 aa13.17□□□□□ -0.3
PTK2-243ENST00000523388 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
PTK2-243ENST00000523388 JMYQ8N9B5 988 aa13.17□□□□□ -0.3
PTK2-243ENST00000523388 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
PTK2-243ENST00000523388 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
PTK2-243ENST00000523388 NPR1P16066 1061 aa13.16□□□□□ -0.3
PTK2-243ENST00000523388 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
PTK2-243ENST00000523388 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
PTK2-243ENST00000523388 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
PTK2-243ENST00000523388 HTRA3P83110 453 aa13.15□□□□□ -0.3
PTK2-243ENST00000523388 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTK2-243ENST00000523388 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
PTK2-243ENST00000523388 ALDH1B1P30837 517 aa13.14□□□□□ -0.31
PTK2-243ENST00000523388 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
PTK2-243ENST00000523388 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
PTK2-243ENST00000523388 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
PTK2-243ENST00000523388 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
PTK2-243ENST00000523388 IQCA1LA6NCM1 817 aa13.13□□□□□ -0.31
PTK2-243ENST00000523388 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
PTK2-243ENST00000523388 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
PTK2-243ENST00000523388 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
PTK2-243ENST00000523388 POTECB2RU33 542 aa13.12□□□□□ -0.31
PTK2-243ENST00000523388 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
PTK2-243ENST00000523388 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
PTK2-243ENST00000523388 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
PTK2-243ENST00000523388 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
PTK2-243ENST00000523388 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
PTK2-243ENST00000523388 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTK2-243ENST00000523388 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
PTK2-243ENST00000523388 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
PTK2-243ENST00000523388 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
PTK2-243ENST00000523388 NFE2L2Q16236 605 aa13.09□□□□□ -0.31
PTK2-243ENST00000523388 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
PTK2-243ENST00000523388 CC2D2BQ6DHV5 1058 aa13.09□□□□□ -0.31
PTK2-243ENST00000523388 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
PTK2-243ENST00000523388 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
PTK2-243ENST00000523388 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
PTK2-243ENST00000523388 HLFQ16534 295 aa13.08□□□□□ -0.32
PTK2-243ENST00000523388 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
PTK2-243ENST00000523388 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
PTK2-243ENST00000523388 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
PTK2-243ENST00000523388 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
PTK2-243ENST00000523388 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
PTK2-243ENST00000523388 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
PTK2-243ENST00000523388 JDP2Q8WYK2 163 aa13.07□□□□□ -0.32
PTK2-243ENST00000523388 RPGRQ92834 1020 aaKnown RBP13.07□□□□□ -0.32
PTK2-243ENST00000523388 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
PTK2-243ENST00000523388 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
PTK2-243ENST00000523388 CCDC88AQ3V6T2 1871 aa13.07□□□□□ -0.32
PTK2-243ENST00000523388 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
PTK2-243ENST00000523388 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
PTK2-243ENST00000523388 MYL6BP14649 208 aa13.06□□□□□ -0.32
PTK2-243ENST00000523388 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
PTK2-243ENST00000523388 PNMA8AQ86V59 439 aaPredicted RBP13.06□□□□□ -0.32
PTK2-243ENST00000523388 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
PTK2-243ENST00000523388 PSMD1Q99460 953 aa13.06□□□□□ -0.32
PTK2-243ENST00000523388 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
PTK2-243ENST00000523388 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
PTK2-243ENST00000523388 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
PTK2-243ENST00000523388 DICER1Q9UPY3 1922 aaKnown RBP13.05□□□□□ -0.32
PTK2-243ENST00000523388 ARFGEF2Q9Y6D5 1785 aa13.05□□□□□ -0.32
PTK2-243ENST00000523388 IARSP41252 1262 aaKnown RBP13.05□□□□□ -0.32
PTK2-243ENST00000523388 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
PTK2-243ENST00000523388 COL13A1Q5TAT6 717 aaPredicted RBP13.05□□□□□ -0.32
PTK2-243ENST00000523388 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PTK2-243ENST00000523388 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
PTK2-243ENST00000523388 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
PTK2-243ENST00000523388 HSPA1AP0DMV8 641 aaKnown RBP13.04□□□□□ -0.32
PTK2-243ENST00000523388 HSPA1BP0DMV9 641 aaKnown RBP13.04□□□□□ -0.32
PTK2-243ENST00000523388 HOXA10P31260 410 aaPredicted RBP13.04□□□□□ -0.32
PTK2-243ENST00000523388 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
PTK2-243ENST00000523388 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
PTK2-243ENST00000523388 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 GPC2Q8N158 579 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
PTK2-243ENST00000523388 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
PTK2-243ENST00000523388 FZD9O00144 591 aa13.03□□□□□ -0.32
PTK2-243ENST00000523388 GPTP24298 496 aa13.03□□□□□ -0.32
PTK2-243ENST00000523388 EPHX2P34913 555 aa13.03□□□□□ -0.32
PTK2-243ENST00000523388 RIPK4P57078 832 aa13.03□□□□□ -0.32
PTK2-243ENST00000523388 RALBP1Q15311 655 aa13.03□□□□□ -0.32
PTK2-243ENST00000523388 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms