RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
SPARC-205ENST00000522348 SRGAP3O43295 1099 aa12□□□□□ -0.49
SPARC-205ENST00000522348 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
SPARC-205ENST00000522348 LRRCC1Q9C099 1032 aa12□□□□□ -0.49
SPARC-205ENST00000522348 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
SPARC-205ENST00000522348 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
SPARC-205ENST00000522348 SURF6O75683 361 aaKnown RBP11.99□□□□□ -0.49
SPARC-205ENST00000522348 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
SPARC-205ENST00000522348 DNAJC10Q8IXB1 793 aa11.99□□□□□ -0.49
SPARC-205ENST00000522348 SMARCC1Q92922 1105 aaPredicted RBP11.99□□□□□ -0.49
SPARC-205ENST00000522348 GJD4Q96KN9 370 aaPredicted RBP11.99□□□□□ -0.49
SPARC-205ENST00000522348 NOP58Q9Y2X3 529 aaKnown RBP11.99□□□□□ -0.49
SPARC-205ENST00000522348 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
SPARC-205ENST00000522348 NRAPQ86VF7 1730 aa11.98□□□□□ -0.49
SPARC-205ENST00000522348 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
SPARC-205ENST00000522348 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
SPARC-205ENST00000522348 C16orf71Q8IYS4 520 aaPredicted RBP11.98□□□□□ -0.49
SPARC-205ENST00000522348 OSBPL3Q9H4L5 887 aa11.98□□□□□ -0.49
SPARC-205ENST00000522348 EXOC6BQ9Y2D4 811 aa11.98□□□□□ -0.49
SPARC-205ENST00000522348 C5P01031 1676 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 APBB1O00213 710 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 SMARCA5O60264 1052 aaPredicted RBP11.97□□□□□ -0.49
SPARC-205ENST00000522348 TRIM28Q13263 835 aaKnown RBP11.97□□□□□ -0.49
SPARC-205ENST00000522348 KIF6Q6ZMV9 814 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 NPM2Q86SE8 214 aaKnown RBP11.97□□□□□ -0.49
SPARC-205ENST00000522348 CCDC191Q8NCU4 936 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 KIF1BPQ96EK5 621 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 DDRGK1Q96HY6 314 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
SPARC-205ENST00000522348 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
SPARC-205ENST00000522348 ATRNO75882 1429 aa11.96□□□□□ -0.49
SPARC-205ENST00000522348 A0A087WZG4 1122 aa11.96□□□□□ -0.49
SPARC-205ENST00000522348 H7C1W4 665 aa11.96□□□□□ -0.49
SPARC-205ENST00000522348 TTC22Q5TAA0 569 aa11.96□□□□□ -0.49
SPARC-205ENST00000522348 ERC1Q8IUD2 1116 aa11.96□□□□□ -0.49
SPARC-205ENST00000522348 ACSBG1Q96GR2 724 aa11.96□□□□□ -0.49
SPARC-205ENST00000522348 CWC25Q9NXE8 425 aaPredicted RBP11.96□□□□□ -0.49
SPARC-205ENST00000522348 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.49
SPARC-205ENST00000522348 COL15A1P39059 1388 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
SPARC-205ENST00000522348 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPARC-205ENST00000522348 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 KAZALD1Q96I82 304 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 SLC4A9Q96Q91 983 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
SPARC-205ENST00000522348 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
SPARC-205ENST00000522348 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 GLI3P10071 1580 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 ERVV-1B6SEH8 477 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
SPARC-205ENST00000522348 SEC24BO95487 1268 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 ATP6V1AP38606 617 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 PDE1AP54750 535 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
SPARC-205ENST00000522348 ISCA1Q9BUE6 129 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 LAMB4A4D0S4 1761 aa11.94□□□□□ -0.5
SPARC-205ENST00000522348 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
SPARC-205ENST00000522348 CDC45O75419 566 aa11.93□□□□□ -0.5
SPARC-205ENST00000522348 SIK1P57059 783 aa11.93□□□□□ -0.5
SPARC-205ENST00000522348 GIGYF2Q6Y7W6 1299 aaKnown RBP11.93□□□□□ -0.5
SPARC-205ENST00000522348 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
SPARC-205ENST00000522348 AOX1Q06278 1338 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 SOCS7O14512 581 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 MX1P20591 662 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 CASP7P55210 303 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
SPARC-205ENST00000522348 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 SEPT12Q8IYM1 358 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
SPARC-205ENST00000522348 OTUD7AQ8TE49 926 aaPredicted RBP11.92□□□□□ -0.5
SPARC-205ENST00000522348 ARXQ96QS3 562 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 BCL11AQ9H165 835 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 CCDC87Q9NVE4 849 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
SPARC-205ENST00000522348 WNK3Q9BYP7 1800 aa11.92□□□□□ -0.5
SPARC-205ENST00000522348 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
SPARC-205ENST00000522348 SALL3Q9BXA9 1300 aa11.91□□□□□ -0.5
SPARC-205ENST00000522348 GSPT1P15170 499 aaKnown RBP11.91□□□□□ -0.5
SPARC-205ENST00000522348 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
SPARC-205ENST00000522348 ITGB4P16144 1822 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 KCNQ2O43526 872 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
SPARC-205ENST00000522348 SDSP20132 328 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
SPARC-205ENST00000522348 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
SPARC-205ENST00000522348 TBC1D32Q96NH3 1257 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 IL1RAPL2Q9NP60 686 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 ZBTB1Q9Y2K1 713 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
SPARC-205ENST00000522348 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
SPARC-205ENST00000522348 MFAP1P55081 439 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms