RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 CLIP2Q9UDT6 1046 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 LIMCH1Q9UPQ0 1083 aa11.4□□□□□ -0.58
CTNNA1-230ENST00000521724 ZNF75DP51815 510 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 PTPN14Q15678 1187 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 ELF2Q15723 593 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 ANO6Q4KMQ2 910 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 NOL10Q9BSC4 688 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 TRIM34Q9BYJ4 488 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 LRRCC1Q9C099 1032 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 TSPYL1Q9H0U9 437 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 CBX8Q9HC52 389 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 FAM53CQ9NYF3 392 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 DLG5Q8TDM6 1919 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 AK2P54819 239 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 PLA2G4DQ86XP0 818 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 CKAP2LQ8IYA6 745 aa11.39□□□□□ -0.59
CTNNA1-230ENST00000521724 ERO1AQ96HE7 468 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 TNMDQ9H2S6 317 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 CPS1P31327 1500 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 CCDC171Q6TFL3 1326 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 VPS37CA5D8V6 355 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 WASLO00401 505 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 NPHP1O15259 732 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 GJB2P29033 226 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 RIMS2Q9UQ26 1411 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 PTPRCP08575 1304 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 METP08581 1390 aa11.38□□□□□ -0.59
CTNNA1-230ENST00000521724 CYP2C19P33261 490 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 HNRNPH2P55795 449 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 CPSF1Q10570 1443 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 RUFY3Q7L099 469 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 UNC5CLQ8IV45 518 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 NUDT16Q96DE0 195 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 IL25Q9H293 177 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 DTNBO60941 627 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 MCM10Q7L590 875 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 TTC14Q96N46 770 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 RAD50Q92878 1312 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 GOLGA6L4A6NEF3 574 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 USP27XA6NNY8 438 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 EPB41L2O43491 1005 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 CCDC144CPQ8IYA2 1237 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 KIF1BPQ96EK5 621 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
CTNNA1-230ENST00000521724 KIAA0232Q92628 1395 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 NUTM2FA1L443 756 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 SLU7O95391 586 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 LIG1P18858 919 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 ZNF165P49910 485 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 KRT85P78386 507 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 CCDC83Q8IWF9 413 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 LRRC8AQ8IWT6 810 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 DACT1Q9NYF0 836 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 SNX14Q9Y5W7 946 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 TUBGCP6Q96RT7 1819 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 HTATSF1O43719 755 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 TTC6Q86TZ1 520 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 PROM2Q8N271 834 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 SPOCK2Q92563 424 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 ZNF446Q9NWS9 450 aa11.36□□□□□ -0.59
CTNNA1-230ENST00000521724 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 ATP7BP35670 1465 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 SKILP12757 684 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 SULT6B1Q6IMI4 303 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 TDRD7Q8NHU6 1098 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 COG3Q96JB2 828 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 GNAI2P04899 355 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 RNF20Q5VTR2 975 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 NYAP1Q6ZVC0 841 aa11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 TRMT1Q9NXH9 659 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 FEZ2Q9UHY8 353 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-230ENST00000521724 NEMFO60524 1076 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 LARGE1O95461 756 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 CASTP20810 708 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 RAD51AP2Q09MP3 1159 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 EIF4A2Q14240 407 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 EDC4Q6P2E9 1401 aaKnown RBP11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 F6X3S4 739 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 SOX12O15370 315 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 CPA1P15085 419 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 TNNT3P45378 269 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 TMCO4Q5TGY1 634 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
CTNNA1-230ENST00000521724 GOLGA6L19H0YKK7 550 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 FERMT3Q86UX7 667 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
CTNNA1-230ENST00000521724 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms