RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
CTNNA1-229ENST00000521683 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
CTNNA1-229ENST00000521683 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
CTNNA1-229ENST00000521683 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-229ENST00000521683 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 NPHP1O15259 732 aa11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 SRGNP10124 158 aa11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
CTNNA1-229ENST00000521683 C21orf2O43822 256 aa11.82□□□□□ -0.52
CTNNA1-229ENST00000521683 NEFMP07197 916 aa11.82□□□□□ -0.52
CTNNA1-229ENST00000521683 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-229ENST00000521683 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
CTNNA1-229ENST00000521683 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
CTNNA1-229ENST00000521683 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
CTNNA1-229ENST00000521683 SLX4Q8IY92 1834 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 NBPF5PQ86XG9 351 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
CTNNA1-229ENST00000521683 DLG5Q8TDM6 1919 aa11.8□□□□□ -0.52
CTNNA1-229ENST00000521683 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
CTNNA1-229ENST00000521683 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
CTNNA1-229ENST00000521683 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-229ENST00000521683 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 POTECB2RU33 542 aa11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 NPR1P16066 1061 aa11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNNA1-229ENST00000521683 HTRA3P83110 453 aa11.78□□□□□ -0.52
CTNNA1-229ENST00000521683 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
CTNNA1-229ENST00000521683 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
CTNNA1-229ENST00000521683 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-229ENST00000521683 IBTKQ9P2D0 1353 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-229ENST00000521683 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.52
CTNNA1-229ENST00000521683 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
CTNNA1-229ENST00000521683 KCNA4P22459 653 aa11.77□□□□□ -0.53
CTNNA1-229ENST00000521683 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-229ENST00000521683 PCNTO95613 3336 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 HLFQ16534 295 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 NYXQ9GZU5 481 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 MIS18AQ9NYP9 233 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
CTNNA1-229ENST00000521683 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
CTNNA1-229ENST00000521683 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
CTNNA1-229ENST00000521683 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
CTNNA1-229ENST00000521683 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-229ENST00000521683 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
CTNNA1-229ENST00000521683 NUP98P52948 1817 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 IQCA1LA6NCM1 817 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 GTF2E1P29083 439 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 SCN4AP35499 1836 aa11.74□□□□□ -0.53
CTNNA1-229ENST00000521683 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
CTNNA1-229ENST00000521683 RALBP1Q15311 655 aa11.73□□□□□ -0.53
CTNNA1-229ENST00000521683 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-229ENST00000521683 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
CTNNA1-229ENST00000521683 UBN2Q6ZU65 1347 aa11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 GIGYF2Q6Y7W6 1299 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 TTLL7Q6ZT98 887 aa11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 PSMD1Q99460 953 aa11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 ZNF277Q9NRM2 450 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 RRP7AQ9Y3A4 280 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-229ENST00000521683 MYL6BP14649 208 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 IARSP41252 1262 aaKnown RBP11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 TSPYL4Q9UJ04 414 aa11.71□□□□□ -0.53
CTNNA1-229ENST00000521683 ZNF541Q9H0D2 1346 aa11.7□□□□□ -0.54
CTNNA1-229ENST00000521683 FZD9O00144 591 aa11.7□□□□□ -0.54
CTNNA1-229ENST00000521683 NTSR2O95665 410 aa11.7□□□□□ -0.54
CTNNA1-229ENST00000521683 POTEIP0CG38 1075 aa11.7□□□□□ -0.54
CTNNA1-229ENST00000521683 POTEJP0CG39 1038 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms