RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 NCOA3Q9Y6Q9 1424 aa8.61□□□□□ -1.03
CTNNA1-228ENST00000521640 KIF16BQ96L93 1317 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 HOXA2O43364 376 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 PLIN1O60240 522 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 NR1I2O75469 434 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 KCNA6P17658 529 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 PRKAR2BP31323 418 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 RIPK4P57078 832 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 ALDH1L2Q3SY69 923 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 MST1RQ04912 1400 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 KDRP35968 1356 aa8.6□□□□□ -1.03
CTNNA1-228ENST00000521640 DLG5Q8TDM6 1919 aa8.59□□□□□ -1.03
CTNNA1-228ENST00000521640 C20orf194Q5TEA3 1177 aa8.59□□□□□ -1.03
CTNNA1-228ENST00000521640 SPIRE2Q8WWL2 714 aa8.59□□□□□ -1.03
CTNNA1-228ENST00000521640 IFT57Q9NWB7 429 aa8.59□□□□□ -1.03
CTNNA1-228ENST00000521640 DCCP43146 1447 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 BCAR3O75815 825 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 GNAI1P63096 354 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 TMEM132AQ24JP5 1023 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 THAP11Q96EK4 314 aa8.58□□□□□ -1.04
CTNNA1-228ENST00000521640 IPO8O15397 1037 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 ZNF853P0CG23 659 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 CANXP27824 592 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 USP46P62068 366 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 ZKSCAN2Q63HK3 967 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 RNF19BQ6ZMZ0 732 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 LRRC37A3O60309 1634 aa8.57□□□□□ -1.04
CTNNA1-228ENST00000521640 IGSF1Q8N6C5 1336 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 SLIT3O75094 1523 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 NFAT5O94916 1531 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 NDUFV2P19404 249 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 PMFBP1Q8TBY8 1022 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 ARHGAP45Q92619 1136 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 CHMP4BQ9H444 224 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 LMTK3Q96Q04 1460 aa8.56□□□□□ -1.04
CTNNA1-228ENST00000521640 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 HTATSF1O43719 755 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 ADH1BP00325 375 aa8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 EXOSC9Q06265 439 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 RRS1Q15050 365 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 BRICD5Q6PL45 260 aa8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 SPSB2Q99619 263 aa8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 KIAA0232Q92628 1395 aa8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 PLEKHG2Q9H7P9 1386 aa8.55□□□□□ -1.04
CTNNA1-228ENST00000521640 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 ABCC6O95255 1503 aa8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 VIRMAQ69YN4 1812 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 S1PR4O95977 384 aa8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 ATF7IPQ6VMQ6 1270 aa8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 DZIP1LQ8IYY4 767 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 FAM160A2Q8N612 972 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 SYMPKQ92797 1274 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 SMC4Q9NTJ3 1288 aa8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 DDX19BQ9UMR2 479 aa8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-228ENST00000521640 LTN1O94822 1766 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 CAMTA1Q9Y6Y1 1673 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 HMOX1P09601 288 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 KCNH5Q8NCM2 988 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 GAS2L2Q8NHY3 880 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 TSR2Q969E8 191 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 PHACTR3Q96KR7 559 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 BABAM1Q9NWV8 329 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 NCAPD2Q15021 1401 aa8.53□□□□□ -1.04
CTNNA1-228ENST00000521640 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 FDX1P10109 184 aa8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 FRAT1Q92837 279 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 COG6Q9Y2V7 657 aa8.52□□□□□ -1.05
CTNNA1-228ENST00000521640 RNF223E7ERA6 249 aa8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 VAMP4O75379 141 aa8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 TRIM27P14373 513 aa8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 FBLN1P23142 703 aa8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 HOXC9P31274 260 aa8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 ANP32AP39687 249 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 MYT1Q01538 1121 aa8.51□□□□□ -1.05
CTNNA1-228ENST00000521640 HDAC1Q13547 482 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms