RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
SPARC-203ENST00000521327 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
SPARC-203ENST00000521327 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
SPARC-203ENST00000521327 NBPF5PQ86XG9 351 aaPredicted RBP18.18■□□□□ 0.5
SPARC-203ENST00000521327 CREBZFQ9NS37 354 aa18.18■□□□□ 0.5
SPARC-203ENST00000521327 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
SPARC-203ENST00000521327 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
SPARC-203ENST00000521327 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
SPARC-203ENST00000521327 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
SPARC-203ENST00000521327 C7orf43Q8WVR3 580 aa18.16■□□□□ 0.5
SPARC-203ENST00000521327 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
SPARC-203ENST00000521327 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
SPARC-203ENST00000521327 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
SPARC-203ENST00000521327 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
SPARC-203ENST00000521327 NPR1P16066 1061 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 MCM10Q7L590 875 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 TIAM2Q8IVF5 1701 aa18.14■□□□□ 0.49
SPARC-203ENST00000521327 FAM177BA6PVY3 158 aa18.13■□□□□ 0.49
SPARC-203ENST00000521327 OLFM4Q6UX06 510 aa18.13■□□□□ 0.49
SPARC-203ENST00000521327 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
SPARC-203ENST00000521327 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
SPARC-203ENST00000521327 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
SPARC-203ENST00000521327 TAF1DQ9H5J8 278 aaPredicted RBP18.13■□□□□ 0.49
SPARC-203ENST00000521327 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
SPARC-203ENST00000521327 NIP7Q9Y221 180 aaKnown RBP eCLIP18.13■□□□□ 0.49
SPARC-203ENST00000521327 ANKRD31Q8N7Z5 1873 aa18.12■□□□□ 0.49
SPARC-203ENST00000521327 KLRG2A4D1S0 409 aaPredicted RBP18.12■□□□□ 0.49
SPARC-203ENST00000521327 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
SPARC-203ENST00000521327 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
SPARC-203ENST00000521327 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
SPARC-203ENST00000521327 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
SPARC-203ENST00000521327 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
SPARC-203ENST00000521327 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.49
SPARC-203ENST00000521327 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
SPARC-203ENST00000521327 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
SPARC-203ENST00000521327 EAPPQ56P03 285 aaPredicted RBP18.11■□□□□ 0.49
SPARC-203ENST00000521327 PASKQ96RG2 1323 aa18.11■□□□□ 0.49
SPARC-203ENST00000521327 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
SPARC-203ENST00000521327 COL11A2P13942 1736 aaPredicted RBP18.1■□□□□ 0.49
SPARC-203ENST00000521327 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
SPARC-203ENST00000521327 CLEC11AQ9Y240 323 aa18.1■□□□□ 0.49
SPARC-203ENST00000521327 CNTNAP1P78357 1384 aa18.09■□□□□ 0.49
SPARC-203ENST00000521327 ZNF541Q9H0D2 1346 aa18.09■□□□□ 0.49
SPARC-203ENST00000521327 ITGBL1O95965 494 aaPredicted RBP18.09■□□□□ 0.49
SPARC-203ENST00000521327 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
SPARC-203ENST00000521327 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
SPARC-203ENST00000521327 CCDC88AQ3V6T2 1871 aa18.09■□□□□ 0.49
SPARC-203ENST00000521327 SLX4Q8IY92 1834 aa18.09■□□□□ 0.49
SPARC-203ENST00000521327 FER1L6Q2WGJ9 1857 aa18.08■□□□□ 0.49
SPARC-203ENST00000521327 TMEM88BA6NKF7 163 aa18.08■□□□□ 0.48
SPARC-203ENST00000521327 FOXN1O15353 648 aa18.08■□□□□ 0.48
SPARC-203ENST00000521327 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
SPARC-203ENST00000521327 HLFQ16534 295 aa18.08■□□□□ 0.48
SPARC-203ENST00000521327 SYNE4Q8N205 404 aa18.08■□□□□ 0.48
SPARC-203ENST00000521327 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.48
SPARC-203ENST00000521327 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
SPARC-203ENST00000521327 EPHX2P34913 555 aa18.07■□□□□ 0.48
SPARC-203ENST00000521327 VEGFBP49765 207 aa18.07■□□□□ 0.48
SPARC-203ENST00000521327 RGL2O15211 777 aa18.06■□□□□ 0.48
SPARC-203ENST00000521327 IARSP41252 1262 aaKnown RBP18.06■□□□□ 0.48
SPARC-203ENST00000521327 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
SPARC-203ENST00000521327 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
SPARC-203ENST00000521327 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
SPARC-203ENST00000521327 FZD9O00144 591 aa18.05■□□□□ 0.48
SPARC-203ENST00000521327 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
SPARC-203ENST00000521327 PPP2R1AP30153 589 aa18.05■□□□□ 0.48
SPARC-203ENST00000521327 PNMA8AQ86V59 439 aaPredicted RBP18.05■□□□□ 0.48
SPARC-203ENST00000521327 AIDAQ96BJ3 306 aa18.05■□□□□ 0.48
SPARC-203ENST00000521327 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
SPARC-203ENST00000521327 MAP1SQ66K74 1059 aaPredicted RBP18.04■□□□□ 0.48
SPARC-203ENST00000521327 CNTROBQ8N137 903 aa18.04■□□□□ 0.48
SPARC-203ENST00000521327 PRDM10Q9NQV6 1147 aa18.04■□□□□ 0.48
SPARC-203ENST00000521327 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
SPARC-203ENST00000521327 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
SPARC-203ENST00000521327 GPC2Q8N158 579 aa18.03■□□□□ 0.48
SPARC-203ENST00000521327 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
SPARC-203ENST00000521327 DICER1Q9UPY3 1922 aaKnown RBP18.02■□□□□ 0.48
SPARC-203ENST00000521327 DEFB115Q30KQ5 88 aa18.01■□□□□ 0.47
SPARC-203ENST00000521327 CRY2Q49AN0 593 aa18.01■□□□□ 0.47
SPARC-203ENST00000521327 PSMD1Q99460 953 aa18.01■□□□□ 0.47
SPARC-203ENST00000521327 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
SPARC-203ENST00000521327 WBP1LQ9NX94 342 aa18.01■□□□□ 0.47
SPARC-203ENST00000521327 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
SPARC-203ENST00000521327 GJA3Q9Y6H8 435 aa18.01■□□□□ 0.47
SPARC-203ENST00000521327 ERVV-1B6SEH8 477 aa18■□□□□ 0.47
SPARC-203ENST00000521327 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
SPARC-203ENST00000521327 RPGRQ92834 1020 aaKnown RBP18■□□□□ 0.47
SPARC-203ENST00000521327 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 RASSF10A6NK89 507 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 GPTP24298 496 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 LBX1P52954 281 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 TTLL7Q6ZT98 887 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 ABCC12Q96J65 1359 aa17.99■□□□□ 0.47
SPARC-203ENST00000521327 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
SPARC-203ENST00000521327 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms