RNA–Protein interactions for RNA: ENST00000521024.1

TOP1MT-212, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-212ENST00000521024 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
TOP1MT-212ENST00000521024 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
TOP1MT-212ENST00000521024 ZNF219Q9P2Y4 722 aaPredicted RBP11.88□□□□□ -0.51
TOP1MT-212ENST00000521024 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
TOP1MT-212ENST00000521024 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 POTECB2RU33 542 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 CCDC93Q567U6 631 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 NPC1L1Q9UHC9 1359 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
TOP1MT-212ENST00000521024 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
TOP1MT-212ENST00000521024 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
TOP1MT-212ENST00000521024 NPR1P16066 1061 aa11.86□□□□□ -0.51
TOP1MT-212ENST00000521024 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
TOP1MT-212ENST00000521024 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 CAMTA2O94983 1202 aa11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 A1BGP04217 495 aa11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 SNRPA1P09661 255 aaKnown RBP11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 COL11A2P13942 1736 aaPredicted RBP11.85□□□□□ -0.51
TOP1MT-212ENST00000521024 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
TOP1MT-212ENST00000521024 CEMIPQ8WUJ3 1361 aa11.84□□□□□ -0.51
TOP1MT-212ENST00000521024 NEFMP07197 916 aa11.84□□□□□ -0.51
TOP1MT-212ENST00000521024 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
TOP1MT-212ENST00000521024 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
TOP1MT-212ENST00000521024 TMEM88BA6NKF7 163 aa11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 PCNTO95613 3336 aa11.83□□□□□ -0.52
TOP1MT-212ENST00000521024 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 PRKAR2BP31323 418 aa11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 JDP2Q8WYK2 163 aa11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 NYXQ9GZU5 481 aa11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 TAF1DQ9H5J8 278 aaPredicted RBP11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
TOP1MT-212ENST00000521024 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
TOP1MT-212ENST00000521024 EAPPQ56P03 285 aaPredicted RBP11.81□□□□□ -0.52
TOP1MT-212ENST00000521024 TMX4Q9H1E5 349 aaPredicted RBP11.81□□□□□ -0.52
TOP1MT-212ENST00000521024 USP16Q9Y5T5 823 aa11.81□□□□□ -0.52
TOP1MT-212ENST00000521024 PASKQ96RG2 1323 aa11.81□□□□□ -0.52
TOP1MT-212ENST00000521024 EPHX2P34913 555 aa11.8□□□□□ -0.52
TOP1MT-212ENST00000521024 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
TOP1MT-212ENST00000521024 GPC2Q8N158 579 aa11.8□□□□□ -0.52
TOP1MT-212ENST00000521024 C7orf43Q8WVR3 580 aa11.8□□□□□ -0.52
TOP1MT-212ENST00000521024 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
TOP1MT-212ENST00000521024 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 LMOD1P29536 600 aaPredicted RBP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 IARSP41252 1262 aaKnown RBP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 MAP2K1Q02750 393 aaPredicted RBP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 PNISRQ8TF01 805 aaKnown RBP11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
TOP1MT-212ENST00000521024 FZD9O00144 591 aa11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 CNGB1Q14028 1251 aaPredicted RBP11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 PSMD1Q99460 953 aa11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 ZNF277Q9NRM2 450 aaPredicted RBP11.78□□□□□ -0.52
TOP1MT-212ENST00000521024 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 FOXN1O15353 648 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 KCNQ3O43525 872 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 ITGBL1O95965 494 aaPredicted RBP11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 ECE1P42892 770 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 VEGFBP49765 207 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 CNTROBQ8N137 903 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 ABT1Q9ULW3 272 aaKnown RBP11.77□□□□□ -0.53
TOP1MT-212ENST00000521024 RASSF10A6NK89 507 aa11.76□□□□□ -0.53
TOP1MT-212ENST00000521024 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
TOP1MT-212ENST00000521024 MCM10Q7L590 875 aa11.76□□□□□ -0.53
TOP1MT-212ENST00000521024 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
TOP1MT-212ENST00000521024 WBP1LQ9NX94 342 aa11.76□□□□□ -0.53
TOP1MT-212ENST00000521024 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
TOP1MT-212ENST00000521024 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
TOP1MT-212ENST00000521024 VPS33BQ9H267 617 aa11.75□□□□□ -0.53
TOP1MT-212ENST00000521024 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
TOP1MT-212ENST00000521024 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms