RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 PALD1Q9ULE6 856 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 NDUFB9Q9Y6M9 179 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 SPATA31A3Q5VYP0 1347 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 CEMIPQ8WUJ3 1361 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
CLK4-206ENST00000520878 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 PRPF40AO75400 957 aaKnown RBP13.73□□□□□ -0.21
CLK4-206ENST00000520878 PRPF40BQ6NWY9 871 aaKnown RBP13.73□□□□□ -0.21
CLK4-206ENST00000520878 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
CLK4-206ENST00000520878 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
CLK4-206ENST00000520878 GPTP24298 496 aa13.72□□□□□ -0.21
CLK4-206ENST00000520878 CPA1P15085 419 aa13.72□□□□□ -0.21
CLK4-206ENST00000520878 GCKRQ14397 625 aa13.72□□□□□ -0.21
CLK4-206ENST00000520878 METTL22Q9BUU2 404 aaPredicted RBP13.71□□□□□ -0.21
CLK4-206ENST00000520878 ADCY9O60503 1353 aa13.71□□□□□ -0.21
CLK4-206ENST00000520878 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
CLK4-206ENST00000520878 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.21
CLK4-206ENST00000520878 TMX3Q96JJ7 454 aa13.71□□□□□ -0.21
CLK4-206ENST00000520878 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.21
CLK4-206ENST00000520878 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.22
CLK4-206ENST00000520878 EDC3Q96F86 508 aaKnown RBP13.7□□□□□ -0.22
CLK4-206ENST00000520878 OSBPL3Q9H4L5 887 aa13.7□□□□□ -0.22
CLK4-206ENST00000520878 PXDNQ92626 1479 aa13.7□□□□□ -0.22
CLK4-206ENST00000520878 IGKV5-2P06315 115 aa13.7□□□□□ -0.22
CLK4-206ENST00000520878 EAF2Q96CJ1 260 aaPredicted RBP13.69□□□□□ -0.22
CLK4-206ENST00000520878 CHAMP1Q96JM3 812 aa13.69□□□□□ -0.22
CLK4-206ENST00000520878 TCEANC2Q96MN5 208 aa13.69□□□□□ -0.22
CLK4-206ENST00000520878 PKP1Q13835 747 aa13.69□□□□□ -0.22
CLK4-206ENST00000520878 CAVIN1Q6NZI2 390 aaKnown RBP13.69□□□□□ -0.22
CLK4-206ENST00000520878 TRIM44Q96DX7 344 aaPredicted RBP13.69□□□□□ -0.22
CLK4-206ENST00000520878 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
CLK4-206ENST00000520878 TFCP2Q12800 502 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 EPHA10Q5JZY3 1008 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 POLA2Q14181 598 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 TLR7Q9NYK1 1049 aaKnown RBP13.68□□□□□ -0.22
CLK4-206ENST00000520878 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
CLK4-206ENST00000520878 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
CLK4-206ENST00000520878 BAG4O95429 457 aaKnown RBP13.67□□□□□ -0.22
CLK4-206ENST00000520878 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
CLK4-206ENST00000520878 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
CLK4-206ENST00000520878 FKBP4Q02790 459 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLK4-206ENST00000520878 STK3Q13188 491 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 CCDC57Q2TAC2 916 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
CLK4-206ENST00000520878 ZNF594Q96JF6 807 aaPredicted RBP13.67□□□□□ -0.22
CLK4-206ENST00000520878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.227e-7■■■■□ 25.1
CLK4-206ENST00000520878 STAP2Q9UGK3 403 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 MCM2P49736 904 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
CLK4-206ENST00000520878 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
CLK4-206ENST00000520878 EXOC5O00471 708 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 TIMM10P62072 90 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 DNAJC10Q8IXB1 793 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 SNRKQ9NRH2 765 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 STARD3NLO95772 234 aa13.66□□□□□ -0.22
CLK4-206ENST00000520878 XRN1Q8IZH2 1706 aaKnown RBP13.66□□□□□ -0.22
CLK4-206ENST00000520878 SGSM2O43147 1006 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 SASH1O94885 1247 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
CLK4-206ENST00000520878 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 FOSBP53539 338 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 PDIA6Q15084 440 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 WASHC4Q2M389 1173 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 RNF20Q5VTR2 975 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 IL25Q9H293 177 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 CCDC83Q8IWF9 413 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 PDRG1Q9NUG6 133 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 CEP126Q9P2H0 1117 aa13.65□□□□□ -0.22
CLK4-206ENST00000520878 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 PTMSP20962 102 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 DBNDD2Q9BQY9 259 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 MST1RQ04912 1400 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 GOLIM4O00461 696 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 NPHP1O15259 732 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
CLK4-206ENST00000520878 PTH1RQ03431 593 aa13.63□□□□□ -0.23
CLK4-206ENST00000520878 HIP1O00291 1037 aa13.63□□□□□ -0.23
CLK4-206ENST00000520878 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
CLK4-206ENST00000520878 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
CLK4-206ENST00000520878 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
CLK4-206ENST00000520878 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
CLK4-206ENST00000520878 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
CLK4-206ENST00000520878 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms