RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
PCDHA2-202ENST00000520672 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
PCDHA2-202ENST00000520672 CEMIPQ8WUJ3 1361 aa16.72■□□□□ 0.27
PCDHA2-202ENST00000520672 GNAI3P08754 354 aa16.72■□□□□ 0.27
PCDHA2-202ENST00000520672 MYRIPQ8NFW9 859 aa16.72■□□□□ 0.27
PCDHA2-202ENST00000520672 CHAMP1Q96JM3 812 aa16.72■□□□□ 0.27
PCDHA2-202ENST00000520672 PDCL2Q8N4E4 241 aa16.71■□□□□ 0.27
PCDHA2-202ENST00000520672 PTMAP06454 111 aaKnown RBP16.71■□□□□ 0.27
PCDHA2-202ENST00000520672 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
PCDHA2-202ENST00000520672 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
PCDHA2-202ENST00000520672 MCTP1Q6DN14 999 aa16.71■□□□□ 0.26
PCDHA2-202ENST00000520672 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.26
PCDHA2-202ENST00000520672 RBSNQ9H1K0 784 aa16.71■□□□□ 0.26
PCDHA2-202ENST00000520672 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 CNPY4Q8N129 248 aa16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 MAP3K2Q9Y2U5 619 aa16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 SLAIN2Q9P270 581 aa16.7■□□□□ 0.26
PCDHA2-202ENST00000520672 SDSP20132 328 aa16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 KCNG1Q9UIX4 513 aa16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 SRGAP3O43295 1099 aa16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 CDC45O75419 566 aa16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 PPP1R42Q7Z4L9 355 aa16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
PCDHA2-202ENST00000520672 ERICH4A6NGS2 130 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 AK9Q5TCS8 1911 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 PKP1Q13835 747 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 SPATA31A3Q5VYP0 1347 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
PCDHA2-202ENST00000520672 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 CYP27B1O15528 508 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 BABAM1Q9NWV8 329 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
PCDHA2-202ENST00000520672 PHKG2P15735 406 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 ZNF496Q96IT1 587 aaPredicted RBP16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 APPP05067 770 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 PTMSP20962 102 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
PCDHA2-202ENST00000520672 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 PDE1AP54750 535 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 EVA1CP58658 441 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
PCDHA2-202ENST00000520672 SLC52A2Q9HAB3 445 aa16.64■□□□□ 0.25
PCDHA2-202ENST00000520672 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
PCDHA2-202ENST00000520672 CABP4P57796 275 aa16.64■□□□□ 0.25
PCDHA2-202ENST00000520672 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
PCDHA2-202ENST00000520672 CAPN2P17655 700 aa16.64■□□□□ 0.25
PCDHA2-202ENST00000520672 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
PCDHA2-202ENST00000520672 KIAA2012Q0VF49 1180 aa16.63■□□□□ 0.25
PCDHA2-202ENST00000520672 ZSCAN23Q3MJ62 389 aa16.63■□□□□ 0.25
PCDHA2-202ENST00000520672 MEGF6O75095 1541 aa16.63■□□□□ 0.25
PCDHA2-202ENST00000520672 A0A0G2JS52 829 aa16.63■□□□□ 0.25
PCDHA2-202ENST00000520672 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
PCDHA2-202ENST00000520672 SLIT3O75094 1523 aa16.63■□□□□ 0.25
PCDHA2-202ENST00000520672 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 XAGE3Q8WTP9 111 aa16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 PDLIM2Q96JY6 352 aa16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 ADCY9O60503 1353 aa16.62■□□□□ 0.25
PCDHA2-202ENST00000520672 MX1P20591 662 aa16.61■□□□□ 0.25
PCDHA2-202ENST00000520672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCDHA2-202ENST00000520672 CCDC39Q9UFE4 941 aa16.61■□□□□ 0.25
PCDHA2-202ENST00000520672 LARP1Q6PKG0 1096 aaKnown RBP16.61■□□□□ 0.25
PCDHA2-202ENST00000520672 SIL1Q9H173 461 aa16.61■□□□□ 0.25
PCDHA2-202ENST00000520672 SOS1Q07889 1333 aaPredicted RBP16.61■□□□□ 0.25
PCDHA2-202ENST00000520672 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms