RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 LOC102724428A0A0B4J2F2 783 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 ABCB7O75027 752 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 SIK1P57059 783 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
VAPB-206ENST00000520497 AAMPQ13685 434 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 INTS3Q68E01 1043 aaKnown RBP10.82□□□□□ -0.68
VAPB-206ENST00000520497 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
VAPB-206ENST00000520497 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 PDGFDQ9GZP0 370 aaPredicted RBP10.82□□□□□ -0.68
VAPB-206ENST00000520497 DDX19BQ9UMR2 479 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 CASZ1Q86V15 1759 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 SCN7AQ01118 1682 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 CYP19A1P11511 503 aaPredicted RBP10.81□□□□□ -0.68
VAPB-206ENST00000520497 ITPRIPQ8IWB1 547 aa10.81□□□□□ -0.68
VAPB-206ENST00000520497 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
VAPB-206ENST00000520497 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
VAPB-206ENST00000520497 IBTKQ9P2D0 1353 aaPredicted RBP10.8□□□□□ -0.68
VAPB-206ENST00000520497 F6X3S4 739 aa10.8□□□□□ -0.68
VAPB-206ENST00000520497 STARD3NLO95772 234 aa10.8□□□□□ -0.68
VAPB-206ENST00000520497 A1BGP04217 495 aa10.8□□□□□ -0.68
VAPB-206ENST00000520497 MYL6BP14649 208 aa10.8□□□□□ -0.68
VAPB-206ENST00000520497 PROM2Q8N271 834 aa10.8□□□□□ -0.68
VAPB-206ENST00000520497 CCDC136Q96JN2 1154 aa10.8□□□□□ -0.68
VAPB-206ENST00000520497 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
VAPB-206ENST00000520497 PI4KAP2A4QPH2 592 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
VAPB-206ENST00000520497 CCT4P50991 539 aaKnown RBP10.79□□□□□ -0.68
VAPB-206ENST00000520497 ITPK1Q13572 414 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 KSR2Q6VAB6 950 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 PI4KAP1Q8N8J0 262 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 XAGE3Q8WTP9 111 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 DNAAF4Q8WXU2 420 aa10.79□□□□□ -0.68
VAPB-206ENST00000520497 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
VAPB-206ENST00000520497 COPS6Q7L5N1 327 aa10.78□□□□□ -0.68
VAPB-206ENST00000520497 ZBTB40Q9NUA8 1239 aa10.78□□□□□ -0.68
VAPB-206ENST00000520497 ZBTB1Q9Y2K1 713 aa10.78□□□□□ -0.68
VAPB-206ENST00000520497 QSER1Q2KHR3 1735 aa10.78□□□□□ -0.68
VAPB-206ENST00000520497 LAMB2P55268 1798 aa10.77□□□□□ -0.68
VAPB-206ENST00000520497 DDX58O95786 925 aaKnown RBP10.77□□□□□ -0.69
VAPB-206ENST00000520497 CRKLP46109 303 aaKnown RBP10.77□□□□□ -0.69
VAPB-206ENST00000520497 AIMP1Q12904 312 aaKnown RBP10.77□□□□□ -0.69
VAPB-206ENST00000520497 BEND3Q5T5X7 828 aa10.77□□□□□ -0.69
VAPB-206ENST00000520497 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.69
VAPB-206ENST00000520497 MAP3K2Q9Y2U5 619 aa10.77□□□□□ -0.69
VAPB-206ENST00000520497 CNTNAP4Q9C0A0 1308 aa10.77□□□□□ -0.69
VAPB-206ENST00000520497 COL24A1Q17RW2 1714 aa10.76□□□□□ -0.69
VAPB-206ENST00000520497 IL6STP40189 918 aaPredicted RBP10.76□□□□□ -0.69
VAPB-206ENST00000520497 INTS5Q6P9B9 1019 aaKnown RBP10.76□□□□□ -0.69
VAPB-206ENST00000520497 SLC4A10Q6U841 1118 aa10.76□□□□□ -0.69
VAPB-206ENST00000520497 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
VAPB-206ENST00000520497 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
VAPB-206ENST00000520497 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
VAPB-206ENST00000520497 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
VAPB-206ENST00000520497 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
VAPB-206ENST00000520497 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
VAPB-206ENST00000520497 METTL22Q9BUU2 404 aaPredicted RBP10.75□□□□□ -0.69
VAPB-206ENST00000520497 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
VAPB-206ENST00000520497 PCDHB15Q9Y5E8 787 aa10.75□□□□□ -0.69
VAPB-206ENST00000520497 ALDH1L1O75891 902 aa10.74□□□□□ -0.69
VAPB-206ENST00000520497 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
VAPB-206ENST00000520497 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
VAPB-206ENST00000520497 RIC3Q7Z5B4 369 aa10.74□□□□□ -0.69
VAPB-206ENST00000520497 LINS1Q8NG48 757 aa10.74□□□□□ -0.69
VAPB-206ENST00000520497 MEIS3Q99687 375 aa10.74□□□□□ -0.69
VAPB-206ENST00000520497 CCNL1Q9UK58 526 aaPredicted RBP10.74□□□□□ -0.69
VAPB-206ENST00000520497 DDX60Q8IY21 1712 aaKnown RBP10.74□□□□□ -0.69
VAPB-206ENST00000520497 KDM2BQ8NHM5 1336 aa10.74□□□□□ -0.69
VAPB-206ENST00000520497 COL15A1P39059 1388 aa10.74□□□□□ -0.69
VAPB-206ENST00000520497 PLSCR1O15162 318 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 IGKV5-2P06315 115 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 KCNQ4P56696 695 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 USP44Q9H0E7 712 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 LRRC4BQ9NT99 713 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 MAP3K15Q6ZN16 1313 aa10.73□□□□□ -0.69
VAPB-206ENST00000520497 NEURL1BA8MQ27 555 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 ZBTB7AO95365 584 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 GNAI3P08754 354 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 NEXNQ0ZGT2 675 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 TXNRD1Q16881 649 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 CWF19L2Q2TBE0 894 aaKnown RBP10.72□□□□□ -0.69
VAPB-206ENST00000520497 KIF6Q6ZMV9 814 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 UTYO14607 1347 aa10.72□□□□□ -0.69
VAPB-206ENST00000520497 ERVV-1B6SEH8 477 aa10.71□□□□□ -0.69
VAPB-206ENST00000520497 HDAC1Q13547 482 aaPredicted RBP10.71□□□□□ -0.69
VAPB-206ENST00000520497 GIGYF2Q6Y7W6 1299 aaKnown RBP10.71□□□□□ -0.69
VAPB-206ENST00000520497 DZIP3Q86Y13 1208 aaKnown RBP10.71□□□□□ -0.69
VAPB-206ENST00000520497 MYD88Q99836 296 aa10.71□□□□□ -0.69
VAPB-206ENST00000520497 ZBTB3Q9H5J0 574 aa10.71□□□□□ -0.69
VAPB-206ENST00000520497 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
VAPB-206ENST00000520497 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
VAPB-206ENST00000520497 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
VAPB-206ENST00000520497 RGL2O15211 777 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 RPS6KA4O75676 772 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 IGHDP01880 384 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 NBPF7P0C2Y1 421 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms