RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 USP44Q9H0E7 712 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 NHSQ6T4R5 1651 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 AFDNP55196 1824 aaKnown RBP15.5■□□□□ 0.07
SPIDR-209ENST00000519141 NEXNQ0ZGT2 675 aa15.5■□□□□ 0.07
SPIDR-209ENST00000519141 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
SPIDR-209ENST00000519141 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
SPIDR-209ENST00000519141 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
SPIDR-209ENST00000519141 RGS3P49796 1198 aa15.49■□□□□ 0.07
SPIDR-209ENST00000519141 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
SPIDR-209ENST00000519141 PALLDQ8WX93 1383 aa15.49■□□□□ 0.07
SPIDR-209ENST00000519141 HMMRO75330 724 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 APBA3O96018 575 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 METTL22Q9BUU2 404 aaPredicted RBP15.48■□□□□ 0.07
SPIDR-209ENST00000519141 IBTKQ9P2D0 1353 aaPredicted RBP15.48■□□□□ 0.07
SPIDR-209ENST00000519141 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 BTAF1O14981 1849 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 EZH2Q15910 746 aaKnown RBP15.48■□□□□ 0.07
SPIDR-209ENST00000519141 CAMKK2Q96RR4 588 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
SPIDR-209ENST00000519141 LRRFIP2Q9Y608 721 aaKnown RBP15.48■□□□□ 0.07
SPIDR-209ENST00000519141 SBF2Q86WG5 1849 aa15.47■□□□□ 0.07
SPIDR-209ENST00000519141 KCNQ2O43526 872 aa15.47■□□□□ 0.07
SPIDR-209ENST00000519141 CYP19A1P11511 503 aaPredicted RBP15.47■□□□□ 0.07
SPIDR-209ENST00000519141 CWF19L2Q2TBE0 894 aaKnown RBP15.47■□□□□ 0.07
SPIDR-209ENST00000519141 MYD88Q99836 296 aa15.47■□□□□ 0.07
SPIDR-209ENST00000519141 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
SPIDR-209ENST00000519141 HDAC5Q9UQL6 1122 aa15.46■□□□□ 0.07
SPIDR-209ENST00000519141 LOC102724428A0A0B4J2F2 783 aa15.45■□□□□ 0.06
SPIDR-209ENST00000519141 NBPF7P0C2Y1 421 aaPredicted RBP15.45■□□□□ 0.06
SPIDR-209ENST00000519141 SIK1P57059 783 aa15.45■□□□□ 0.06
SPIDR-209ENST00000519141 TTLL7Q6ZT98 887 aa15.45■□□□□ 0.06
SPIDR-209ENST00000519141 ZNF330Q9Y3S2 320 aaPredicted RBP15.45■□□□□ 0.06
SPIDR-209ENST00000519141 RREB1Q92766 1687 aa15.45■□□□□ 0.06
SPIDR-209ENST00000519141 NEURL1BA8MQ27 555 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 IGKV5-2P06315 115 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 ATP6V1AP38606 617 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 NUCB1Q02818 461 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 DCTPP1Q9H773 170 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 COL5A3P25940 1745 aaPredicted RBP15.44■□□□□ 0.06
SPIDR-209ENST00000519141 GRM8O00222 908 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 KIF6Q6ZMV9 814 aa15.44■□□□□ 0.06
SPIDR-209ENST00000519141 UTYO14607 1347 aa15.43■□□□□ 0.06
SPIDR-209ENST00000519141 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
SPIDR-209ENST00000519141 PTF1AQ7RTS3 328 aa15.43■□□□□ 0.06
SPIDR-209ENST00000519141 CHD1LQ86WJ1 897 aa15.43■□□□□ 0.06
SPIDR-209ENST00000519141 ZBTB3Q9H5J0 574 aa15.43■□□□□ 0.06
SPIDR-209ENST00000519141 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
SPIDR-209ENST00000519141 GCKRQ14397 625 aa15.42■□□□□ 0.06
SPIDR-209ENST00000519141 ANKRD45Q5TZF3 282 aa15.42■□□□□ 0.06
SPIDR-209ENST00000519141 NPM2Q86SE8 214 aaKnown RBP15.41■□□□□ 0.06
SPIDR-209ENST00000519141 LNPKQ9C0E8 428 aa15.41■□□□□ 0.06
SPIDR-209ENST00000519141 BCL11BQ9C0K0 894 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-209ENST00000519141 CCDC87Q9NVE4 849 aa15.41■□□□□ 0.06
SPIDR-209ENST00000519141 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-209ENST00000519141 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
SPIDR-209ENST00000519141 PNMA6EA0A0J9YXQ4 647 aa15.41■□□□□ 0.06
SPIDR-209ENST00000519141 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-209ENST00000519141 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-209ENST00000519141 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
SPIDR-209ENST00000519141 ATP5J2-PTCD1G3V325 749 aa15.4■□□□□ 0.06
SPIDR-209ENST00000519141 PLSCR1O15162 318 aa15.4■□□□□ 0.06
SPIDR-209ENST00000519141 LY75O60449 1722 aa15.4■□□□□ 0.06
SPIDR-209ENST00000519141 CRKLP46109 303 aaKnown RBP15.4■□□□□ 0.06
SPIDR-209ENST00000519141 ITPK1Q13572 414 aa15.4■□□□□ 0.06
SPIDR-209ENST00000519141 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
SPIDR-209ENST00000519141 PDE4AP27815 886 aa15.39■□□□□ 0.05
SPIDR-209ENST00000519141 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
SPIDR-209ENST00000519141 SSH3Q8TE77 659 aa15.39■□□□□ 0.05
SPIDR-209ENST00000519141 ARXQ96QS3 562 aa15.39■□□□□ 0.05
SPIDR-209ENST00000519141 NUP98P52948 1817 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 SRGAP3O43295 1099 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 MTX1Q13505 466 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 POLA2Q14181 598 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 INTS5Q6P9B9 1019 aaKnown RBP15.38■□□□□ 0.05
SPIDR-209ENST00000519141 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
SPIDR-209ENST00000519141 A0A087WZG4 1122 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 R3HDM1Q15032 1099 aaKnown RBP15.38■□□□□ 0.05
SPIDR-209ENST00000519141 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
SPIDR-209ENST00000519141 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
SPIDR-209ENST00000519141 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
SPIDR-209ENST00000519141 COL15A1P39059 1388 aa15.37■□□□□ 0.05
SPIDR-209ENST00000519141 APBB1O00213 710 aa15.36■□□□□ 0.05
SPIDR-209ENST00000519141 EIF5P55010 431 aaKnown RBP15.36■□□□□ 0.05
SPIDR-209ENST00000519141 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
SPIDR-209ENST00000519141 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
SPIDR-209ENST00000519141 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
SPIDR-209ENST00000519141 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
SPIDR-209ENST00000519141 BICC1Q9H694 974 aaKnown RBP15.36■□□□□ 0.05
SPIDR-209ENST00000519141 EXOC6BQ9Y2D4 811 aa15.36■□□□□ 0.05
SPIDR-209ENST00000519141 TAF1LQ8IZX4 1826 aa15.36■□□□□ 0.05
SPIDR-209ENST00000519141 FAM161AQ3B820 660 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 PROM2Q8N271 834 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 KAZALD1Q96I82 304 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
SPIDR-209ENST00000519141 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 ERVV-1B6SEH8 477 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 TRIM28Q13263 835 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms