RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 PANK3Q9H999 370 aa12.09□□□□□ -0.47
PVT1-207ENST00000518528 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
PVT1-207ENST00000518528 NPR1P16066 1061 aa12.08□□□□□ -0.48
PVT1-207ENST00000518528 LMOD1P29536 600 aaPredicted RBP12.08□□□□□ -0.48
PVT1-207ENST00000518528 RGS19P49795 217 aa12.08□□□□□ -0.48
PVT1-207ENST00000518528 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
PVT1-207ENST00000518528 NBPF5PQ86XG9 351 aaPredicted RBP12.08□□□□□ -0.48
PVT1-207ENST00000518528 TJP1Q07157 1748 aa12.08□□□□□ -0.48
PVT1-207ENST00000518528 TEFQ10587 303 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 JDP2Q8WYK2 163 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 CAPNS2Q96L46 248 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 ZNF277Q9NRM2 450 aaPredicted RBP12.07□□□□□ -0.48
PVT1-207ENST00000518528 NRXN2Q9P2S2 1712 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 KNSTRNQ9Y448 316 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 ZNF541Q9H0D2 1346 aa12.07□□□□□ -0.48
PVT1-207ENST00000518528 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
PVT1-207ENST00000518528 CA12O43570 354 aa12.06□□□□□ -0.48
PVT1-207ENST00000518528 EIF6P56537 245 aaKnown RBP12.06□□□□□ -0.48
PVT1-207ENST00000518528 GPC2Q8N158 579 aa12.06□□□□□ -0.48
PVT1-207ENST00000518528 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
PVT1-207ENST00000518528 GPR101Q96P66 508 aaPredicted RBP12.06□□□□□ -0.48
PVT1-207ENST00000518528 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
PVT1-207ENST00000518528 RNF123Q5XPI4 1314 aa12.06□□□□□ -0.48
PVT1-207ENST00000518528 CAMTA2O94983 1202 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 HMOX1P09601 288 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
PVT1-207ENST00000518528 GRM1Q13255 1194 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
PVT1-207ENST00000518528 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
PVT1-207ENST00000518528 ZNF496Q96IT1 587 aaPredicted RBP12.05□□□□□ -0.48
PVT1-207ENST00000518528 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 MRC1P22897 1456 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 DLEC1Q9Y238 1755 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
PVT1-207ENST00000518528 FZD9O00144 591 aa12.04□□□□□ -0.48
PVT1-207ENST00000518528 MAP2K2P36507 400 aa12.04□□□□□ -0.48
PVT1-207ENST00000518528 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
PVT1-207ENST00000518528 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
PVT1-207ENST00000518528 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
PVT1-207ENST00000518528 A1BGP04217 495 aa12.03□□□□□ -0.48
PVT1-207ENST00000518528 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
PVT1-207ENST00000518528 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
PVT1-207ENST00000518528 GJA3Q9Y6H8 435 aa12.03□□□□□ -0.48
PVT1-207ENST00000518528 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
PVT1-207ENST00000518528 CYP4F22Q6NT55 531 aa12.02□□□□□ -0.49
PVT1-207ENST00000518528 GAS2L2Q8NHY3 880 aa12.02□□□□□ -0.49
PVT1-207ENST00000518528 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
PVT1-207ENST00000518528 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
PVT1-207ENST00000518528 DIAPH1O60610 1272 aaKnown RBP12.01□□□□□ -0.49
PVT1-207ENST00000518528 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
PVT1-207ENST00000518528 PSMD1Q99460 953 aa12.01□□□□□ -0.49
PVT1-207ENST00000518528 SCN4AP35499 1836 aa12□□□□□ -0.49
PVT1-207ENST00000518528 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
PVT1-207ENST00000518528 RGL2O15211 777 aa12□□□□□ -0.49
PVT1-207ENST00000518528 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■■■ 29.6
PVT1-207ENST00000518528 MCOLN1Q9GZU1 580 aa12□□□□□ -0.49
PVT1-207ENST00000518528 NIP7Q9Y221 180 aaKnown RBP eCLIP12□□□□□ -0.49
PVT1-207ENST00000518528 TLL2Q9Y6L7 1015 aa12□□□□□ -0.49
PVT1-207ENST00000518528 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
PVT1-207ENST00000518528 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
PVT1-207ENST00000518528 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
PVT1-207ENST00000518528 SCN11AQ9UI33 1791 aa11.99□□□□□ -0.49
PVT1-207ENST00000518528 DICER1Q9UPY3 1922 aaKnown RBP11.99□□□□□ -0.49
PVT1-207ENST00000518528 BTBD11A6QL63 1104 aa11.98□□□□□ -0.49
PVT1-207ENST00000518528 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
PVT1-207ENST00000518528 DGKZQ13574 1117 aa11.98□□□□□ -0.49
PVT1-207ENST00000518528 OLFM4Q6UX06 510 aa11.98□□□□□ -0.49
PVT1-207ENST00000518528 NIM1KQ8IY84 436 aa11.98□□□□□ -0.49
PVT1-207ENST00000518528 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
PVT1-207ENST00000518528 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
PVT1-207ENST00000518528 FAM177BA6PVY3 158 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 AOC2O75106 756 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 SNRPA1P09661 255 aaKnown RBP11.97□□□□□ -0.49
PVT1-207ENST00000518528 EPS15P42566 896 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 CST9Q5W186 159 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 RPGRQ92834 1020 aaKnown RBP11.97□□□□□ -0.49
PVT1-207ENST00000518528 HHIPL1Q96JK4 782 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 NYXQ9GZU5 481 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
PVT1-207ENST00000518528 TRAF5O00463 557 aa11.96□□□□□ -0.49
PVT1-207ENST00000518528 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
PVT1-207ENST00000518528 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.49
PVT1-207ENST00000518528 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
PVT1-207ENST00000518528 ANKRD31Q8N7Z5 1873 aa11.95□□□□□ -0.5
PVT1-207ENST00000518528 COL11A2P13942 1736 aaPredicted RBP11.95□□□□□ -0.5
PVT1-207ENST00000518528 HSPA5P11021 654 aaKnown RBP11.95□□□□□ -0.5
PVT1-207ENST00000518528 SCNN1DP51172 638 aa11.95□□□□□ -0.5
PVT1-207ENST00000518528 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
PVT1-207ENST00000518528 SAPCD2Q86UD0 394 aa11.95□□□□□ -0.5
PVT1-207ENST00000518528 USP16Q9Y5T5 823 aa11.95□□□□□ -0.5
PVT1-207ENST00000518528 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
PVT1-207ENST00000518528 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
PVT1-207ENST00000518528 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
PVT1-207ENST00000518528 NOGQ13253 232 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms