RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 BRMS1Q9HCU9 246 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 FLIIQ13045 1269 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 TNMDQ9H2S6 317 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 RIMS2Q9UQ26 1411 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 MROH2AA6NES4 1674 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 IQSEC2Q5JU85 1478 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 STX6O43752 255 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 TERF1P54274 439 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 ANAPC15P60006 121 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.36
PCDHGA1-202ENST00000517417 ACEP12821 1306 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 DDX11Q96FC9 970 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 NUP62CLQ9H1M0 184 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 CAMK4Q16566 473 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 OLFM4Q6UX06 510 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 KIF2CQ99661 725 aa12.77□□□□□ -0.37
PCDHGA1-202ENST00000517417 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 MYD88Q99836 296 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 UBE2HP62256 183 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 CADPS2Q86UW7 1296 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
PCDHGA1-202ENST00000517417 GLRX3O76003 335 aaKnown RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 SMC2O95347 1197 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 ZSCAN22P10073 491 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 DNAAF4Q8WXU2 420 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 MAP3K11Q16584 847 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 INTS4Q96HW7 963 aaKnown RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 TOM1O60784 492 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 ATP2B2Q01814 1243 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA1-202ENST00000517417 RAB11FIP3O75154 756 aa12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 CHMLP26374 656 aa12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 TNNT3P45378 269 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 TTLL5Q6EMB2 1281 aa12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 CCDC43Q96MW1 224 aaKnown RBP12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 GJB2P29033 226 aa12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 SPATA32Q96LK8 384 aa12.74□□□□□ -0.37
PCDHGA1-202ENST00000517417 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 G2E3Q7L622 706 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 ADGRB3O60242 1522 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 STARD3NLO95772 234 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 CCDC112Q8NEF3 446 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 BRD1O95696 1058 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 TRIM22Q8IYM9 498 aa12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA1-202ENST00000517417 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 TDO2P48775 406 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 A0A087WZG4 1122 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 DDIT3P35638 169 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 CKAP2LQ8IYA6 745 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
PCDHGA1-202ENST00000517417 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 ATP5J2-PTCD1G3V325 749 aa12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 PPP1R42Q7Z4L9 355 aa12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 C17orf53Q8N3J3 647 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 SH2B1Q9NRF2 756 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
PCDHGA1-202ENST00000517417 CCDC69A6NI79 296 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 F13A1P00488 732 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
PCDHGA1-202ENST00000517417 NCOA3Q9Y6Q9 1424 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms