RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 TRMT44Q8IYL2 757 aaKnown RBP0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 NBPF15Q8N660 670 aa0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 SHKBP1Q8TBC3 707 aa0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 C1QTNF2Q9BXJ5 285 aa0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 BSDC1Q9NW68 430 aaPredicted RBP0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 PIM2Q9P1W9 311 aa0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 PALD1Q9ULE6 856 aa0.47□□□□□ -2.33
RNU6-1238P-201ENST00000517215 SPATA31C2B4DYI2 1134 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DHX15O43143 795 aaKnown RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MED14OSP0DP75 135 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FOSL1P15407 271 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TACR2P21452 398 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PCBP4P57723 403 aaKnown RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 KRTAP10-12P60413 245 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DHX9Q08211 1270 aaKnown RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 POU4F2Q12837 409 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CPSF6Q16630 551 aaKnown RBP eCLIP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 RTN1Q16799 776 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 EFHC2Q5JST6 749 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 IGF2-ASQ6U949 168 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 C20orf204Q6ZNR8 217 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 BPHLQ86WA6 291 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DTWD1Q8N5C7 304 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 MARCH10Q8NA82 808 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 XYLT2Q9H1B5 865 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PCED1AQ9H1Q7 454 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 C7orf69Q9H7B7 122 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 AKTIPQ9H8T0 292 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 UNKLQ9H9P5 680 aaKnown RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TIMMDC1Q9NPL8 285 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CNOT11Q9UKZ1 510 aaKnown RBP0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 STARD13Q9Y3M8 1113 aa0.46□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZNF503-AS2A6NEH8 195 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TCAF2A6NFQ2 919 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SPDYE16A6NNV3 312 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 C1QTNF3-AMACRE9PGA6 284 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 WASLO00401 505 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LILRB5O75023 590 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 EGFRP00533 1210 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 HRCP23327 699 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CTGFP29279 349 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LINC00310P59036 64 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PLP2Q04941 152 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PLCL1Q15111 1095 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SWI5Q1ZZU3 235 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TIGD5Q53EQ6 642 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LCE3AQ5TA76 89 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 USP51Q70EK9 711 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ILDR2Q71H61 639 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 RETREG3Q86VR2 466 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZSWIM9Q86XI8 627 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 Q8N1X5 172 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 KDF1Q8NAX2 398 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 IRF2BPLQ9H1B7 796 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GPAMQ9HCL2 828 aa0.45□□□□□ -2.34
RNU6-1238P-201ENST00000517215 A0A1B0GTH6 734 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 HMX2A2RU54 273 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 OTOL1A6NHN0 477 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ERVV-2B6SEH9 535 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TRIM13O60858 407 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SIN3BO75182 1162 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TMEM253P0C7T8 217 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CSB-PGBD3P0DP91 1061 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FUT4P22083 530 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 NANOS3P60323 173 aaKnown RBP0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 KRTAP10-5P60370 271 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 AGERQ15109 404 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GRIK5Q16478 980 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ZNF827Q17R98 1081 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 UVSSAQ2YD98 709 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LCE1AQ5T7P2 110 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FIGNL1Q6PIW4 674 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ATG14Q6ZNE5 492 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TAS1R3Q7RTX0 852 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FBXO11Q86XK2 927 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TRIM42Q8IWZ5 723 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PGBD3Q8N328 593 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TMEM130Q8N3G9 435 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FBXO15Q8NCQ5 510 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FOXD4L4Q8WXT5 416 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TNFRSF25Q93038 417 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 TEPSINQ96N21 525 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 RC3H2Q9HBD1 1191 aaKnown RBP0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PRR12Q9ULL5 1215 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 LEMD3Q9Y2U8 911 aa0.44□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GRXCR2A6NFK2 248 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 DDX11L8A8MPP1 907 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 WDR64B1ANS9 1081 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 F8W735 103 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FZD7O75084 574 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GIGYF1O75420 1035 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SASH1O94885 1247 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 CD33P20138 364 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 GLDCP23378 1020 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FAM117BQ6P1L5 589 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 SULF1Q8IWU6 871 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 ARMC10Q8N2F6 343 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 FLAD1Q8NFF5 587 aa0.43□□□□□ -2.34
RNU6-1238P-201ENST00000517215 PXYLP1Q8TE99 480 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms