RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
SCARNA11.1-201ENST00000516918 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CCER1Q8TC90 406 aaPredicted RBP9.39□□□□□ -0.91
SCARNA11.1-201ENST00000516918 ANKRD31Q8N7Z5 1873 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 FOXN1O15353 648 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 EAPPQ56P03 285 aaPredicted RBP9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 SOGA3Q5TF21 947 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 OLFM4Q6UX06 510 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 TAF1DQ9H5J8 278 aaPredicted RBP9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 ZNF277Q9NRM2 450 aaPredicted RBP9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 SLX4Q8IY92 1834 aa9.38□□□□□ -0.91
SCARNA11.1-201ENST00000516918 COL11A2P13942 1736 aaPredicted RBP9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 IQCA1LA6NCM1 817 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 PRKAR2BP31323 418 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 C7orf43Q8WVR3 580 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
SCARNA11.1-201ENST00000516918 PCNTO95613 3336 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 PASKQ96RG2 1323 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 ZNF541Q9H0D2 1346 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 NPR1P16066 1061 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 VEGFBP49765 207 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 FKBP4Q02790 459 aaKnown RBP eCLIP9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CEMIPQ8WUJ3 1361 aa9.36□□□□□ -0.91
SCARNA11.1-201ENST00000516918 COL3A1P02461 1466 aaPredicted RBP9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 SNRPA1P09661 255 aaKnown RBP9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CLEC4GQ6UXB4 293 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 TPTE2Q6XPS3 522 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 MCM10Q7L590 875 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 AIDAQ96BJ3 306 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 HACL1Q9UJ83 578 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 ZNF652Q9Y2D9 606 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
SCARNA11.1-201ENST00000516918 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 EPHX2P34913 555 aa9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 DCTN1Q14203 1278 aa9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 MAP1SQ66K74 1059 aaPredicted RBP9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 NBPF10Q6P3W6 841 aaKnown RBP9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 SYNE4Q8N205 404 aa9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 NBPF15Q8N660 670 aa9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 RTF1Q92541 710 aaKnown RBP9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
SCARNA11.1-201ENST00000516918 RNF123Q5XPI4 1314 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 KLRG2A4D1S0 409 aaPredicted RBP9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 U2AF1L5P0DN76 240 aaPredicted RBP9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 IARSP41252 1262 aaKnown RBP9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 LBX1P52954 281 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 U2AF1Q01081 240 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 HLFQ16534 295 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 RTKN2Q8IZC4 609 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 CNTROBQ8N137 903 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 NGEFQ8N5V2 710 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 CFAP53Q96M91 514 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 PRDM10Q9NQV6 1147 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 MIS18AQ9NYP9 233 aa9.33□□□□□ -0.92
SCARNA11.1-201ENST00000516918 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
SCARNA11.1-201ENST00000516918 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
SCARNA11.1-201ENST00000516918 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
SCARNA11.1-201ENST00000516918 ABT1Q9ULW3 272 aaKnown RBP9.32□□□□□ -0.92
SCARNA11.1-201ENST00000516918 GJA3Q9Y6H8 435 aa9.32□□□□□ -0.92
SCARNA11.1-201ENST00000516918 FZD9O00144 591 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 TCERG1O14776 1098 aaKnown RBP9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 FMR1Q06787 632 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 DEFB115Q30KQ5 88 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 JDP2Q8WYK2 163 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 NUDCQ9Y266 331 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 SIPA1L3O60292 1781 aaPredicted RBP9.31□□□□□ -0.92
SCARNA11.1-201ENST00000516918 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 HSPA8P11142 646 aaKnown RBP9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 GRM1Q13255 1194 aa9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 GPC2Q8N158 579 aa9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 RRP7AQ9Y3A4 280 aaKnown RBP9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
SCARNA11.1-201ENST00000516918 BCORQ6W2J9 1755 aa9.29□□□□□ -0.92
SCARNA11.1-201ENST00000516918 SCN4AP35499 1836 aa9.29□□□□□ -0.92
SCARNA11.1-201ENST00000516918 ABCC12Q96J65 1359 aa9.29□□□□□ -0.92
SCARNA11.1-201ENST00000516918 GPTP24298 496 aa9.29□□□□□ -0.92
SCARNA11.1-201ENST00000516918 EPS15P42566 896 aa9.29□□□□□ -0.92
SCARNA11.1-201ENST00000516918 TAF7Q15545 349 aaPredicted RBP9.29□□□□□ -0.92
SCARNA11.1-201ENST00000516918 TTLL7Q6ZT98 887 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms