RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 COL22A1Q8NFW1 1626 aaPredicted RBP18.69■□□□□ 0.58
SDHA-218ENST00000515752 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
SDHA-218ENST00000515752 ROBO1Q9Y6N7 1651 aa18.68■□□□□ 0.58
SDHA-218ENST00000515752 G3BP1Q13283 466 aaKnown RBP eCLIP18.68■□□□□ 0.581e-7■■□□□ 12.2
SDHA-218ENST00000515752 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
SDHA-218ENST00000515752 SLKQ9H2G2 1235 aaPredicted RBP18.68■□□□□ 0.58
SDHA-218ENST00000515752 BICC1Q9H694 974 aaKnown RBP18.68■□□□□ 0.58
SDHA-218ENST00000515752 GLI3P10071 1580 aa18.67■□□□□ 0.58
SDHA-218ENST00000515752 UBR2Q8IWV8 1755 aa18.67■□□□□ 0.58
SDHA-218ENST00000515752 KCPQ6ZWJ8 1503 aa18.67■□□□□ 0.58
SDHA-218ENST00000515752 GLRX3O76003 335 aaKnown RBP18.67■□□□□ 0.58
SDHA-218ENST00000515752 RILPL2Q969X0 211 aa18.67■□□□□ 0.58
SDHA-218ENST00000515752 KAZALD1Q96I82 304 aa18.67■□□□□ 0.58
SDHA-218ENST00000515752 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
SDHA-218ENST00000515752 CHMP5Q9NZZ3 219 aa18.67■□□□□ 0.58
SDHA-218ENST00000515752 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
SDHA-218ENST00000515752 CHMLP26374 656 aa18.66■□□□□ 0.58
SDHA-218ENST00000515752 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
SDHA-218ENST00000515752 CNTROBQ8N137 903 aa18.66■□□□□ 0.58
SDHA-218ENST00000515752 ESYT1Q9BSJ8 1104 aa18.66■□□□□ 0.58
SDHA-218ENST00000515752 MCCP23508 829 aa18.65■□□□□ 0.58
SDHA-218ENST00000515752 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
SDHA-218ENST00000515752 DISP2A7MBM2 1401 aa18.65■□□□□ 0.58
SDHA-218ENST00000515752 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
SDHA-218ENST00000515752 IFIT2P09913 472 aaKnown RBP18.65■□□□□ 0.58
SDHA-218ENST00000515752 SHANK3Q9BYB0 1731 aa18.65■□□□□ 0.58
SDHA-218ENST00000515752 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
SDHA-218ENST00000515752 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
SDHA-218ENST00000515752 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
SDHA-218ENST00000515752 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
SDHA-218ENST00000515752 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
SDHA-218ENST00000515752 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
SDHA-218ENST00000515752 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
SDHA-218ENST00000515752 LTBP4Q8N2S1 1624 aa18.64■□□□□ 0.57
SDHA-218ENST00000515752 EXOC5O00471 708 aa18.63■□□□□ 0.57
SDHA-218ENST00000515752 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
SDHA-218ENST00000515752 RABL6Q3YEC7 729 aaPredicted RBP18.63■□□□□ 0.57
SDHA-218ENST00000515752 ST18O60284 1047 aa18.63■□□□□ 0.57
SDHA-218ENST00000515752 ANAPC15P60006 121 aa18.63■□□□□ 0.57
SDHA-218ENST00000515752 COPRSQ9NQ92 184 aa18.63■□□□□ 0.57
SDHA-218ENST00000515752 THRAP3Q9Y2W1 955 aaKnown RBP18.63■□□□□ 0.57
SDHA-218ENST00000515752 A0A087WZG4 1122 aa18.62■□□□□ 0.57
SDHA-218ENST00000515752 STARD3NLO95772 234 aa18.62■□□□□ 0.57
SDHA-218ENST00000515752 CCDC191Q8NCU4 936 aa18.61■□□□□ 0.57
SDHA-218ENST00000515752 CWC25Q9NXE8 425 aaPredicted RBP18.61■□□□□ 0.57
SDHA-218ENST00000515752 TUBGCP6Q96RT7 1819 aa18.61■□□□□ 0.57
SDHA-218ENST00000515752 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
SDHA-218ENST00000515752 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
SDHA-218ENST00000515752 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
SDHA-218ENST00000515752 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
SDHA-218ENST00000515752 LRP6O75581 1613 aa18.6■□□□□ 0.57
SDHA-218ENST00000515752 H7C1W4 665 aa18.6■□□□□ 0.57
SDHA-218ENST00000515752 A1BGP04217 495 aa18.6■□□□□ 0.57
SDHA-218ENST00000515752 PIGBQ92521 554 aa18.6■□□□□ 0.57
SDHA-218ENST00000515752 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
SDHA-218ENST00000515752 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
SDHA-218ENST00000515752 AACSQ86V21 672 aa18.59■□□□□ 0.57
SDHA-218ENST00000515752 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
SDHA-218ENST00000515752 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.57
SDHA-218ENST00000515752 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.57
SDHA-218ENST00000515752 SASH1O94885 1247 aa18.58■□□□□ 0.57
SDHA-218ENST00000515752 CASP7P55210 303 aa18.58■□□□□ 0.57
SDHA-218ENST00000515752 UNC5CLQ8IV45 518 aa18.58■□□□□ 0.57
SDHA-218ENST00000515752 IL17RAQ96F46 866 aa18.58■□□□□ 0.57
SDHA-218ENST00000515752 TOM1O60784 492 aa18.58■□□□□ 0.56
SDHA-218ENST00000515752 DDIT3P35638 169 aa18.58■□□□□ 0.56
SDHA-218ENST00000515752 MCM2P49736 904 aa18.58■□□□□ 0.56
SDHA-218ENST00000515752 EVI5LQ96CN4 794 aa18.58■□□□□ 0.56
SDHA-218ENST00000515752 ANO2Q9NQ90 1003 aa18.58■□□□□ 0.56
SDHA-218ENST00000515752 ATG3Q9NT62 314 aa18.58■□□□□ 0.56
SDHA-218ENST00000515752 COL16A1Q07092 1604 aaPredicted RBP18.57■□□□□ 0.56
SDHA-218ENST00000515752 HIP1O00291 1037 aa18.57■□□□□ 0.56
SDHA-218ENST00000515752 TRIM28Q13263 835 aaKnown RBP18.57■□□□□ 0.56
SDHA-218ENST00000515752 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
SDHA-218ENST00000515752 SPRYD3Q8NCJ5 442 aa18.57■□□□□ 0.56
SDHA-218ENST00000515752 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
SDHA-218ENST00000515752 BCL9O00512 1426 aa18.57■□□□□ 0.56
SDHA-218ENST00000515752 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
SDHA-218ENST00000515752 TOGARAM1Q9Y4F4 1720 aa18.56■□□□□ 0.56
SDHA-218ENST00000515752 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
SDHA-218ENST00000515752 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
SDHA-218ENST00000515752 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
SDHA-218ENST00000515752 SGSM2O43147 1006 aa18.55■□□□□ 0.56
SDHA-218ENST00000515752 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
SDHA-218ENST00000515752 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
SDHA-218ENST00000515752 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
SDHA-218ENST00000515752 CD2BP2O95400 341 aaKnown RBP18.54■□□□□ 0.56
SDHA-218ENST00000515752 DEKP35659 375 aaKnown RBP18.54■□□□□ 0.56
SDHA-218ENST00000515752 TCIRG1Q13488 830 aa18.54■□□□□ 0.56
SDHA-218ENST00000515752 DIAPH3Q9NSV4 1193 aa18.54■□□□□ 0.56
SDHA-218ENST00000515752 AFDNP55196 1824 aaKnown RBP18.54■□□□□ 0.56
SDHA-218ENST00000515752 ISCA1Q9BUE6 129 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 SIL1Q9H173 461 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 SPATA31A1Q5TZJ5 1347 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 FOXO4P98177 505 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 HSP90AB3PQ58FF7 597 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 LMBR1LQ6UX01 489 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 DNAJC10Q8IXB1 793 aa18.53■□□□□ 0.56
SDHA-218ENST00000515752 ZBTB3Q9H5J0 574 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms