RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-210	ENST00000515725	SRP68	Q9UHB9	627 aa	Known RBP	11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	ABCC4	O15439	1325 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	SPATA31A6	Q5VVP1	1343 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	HEG1	Q9ULI3	1381 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	PHLPP1	O60346	1717 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	BEND3	Q5T5X7	828 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	GORAB	Q5T7V8	394 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	AK7	Q96M32	723 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	ITPK1	Q13572	414 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	PDIA6	Q15084	440 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	NCBP3	Q53F19	620 aa	Known RBP	11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	LINS1	Q8NG48	757 aa		11.22	□□□□□ -0.61
COPG1-210	ENST00000515725	DLG5	Q8TDM6	1919 aa		11.21	□□□□□ -0.61
COPG1-210	ENST00000515725	ZPR1	O75312	459 aa		11.21	□□□□□ -0.61
COPG1-210	ENST00000515725	MSL1	Q68DK7	614 aa		11.21	□□□□□ -0.61
COPG1-210	ENST00000515725	HELB	Q8NG08	1087 aa	Predicted RBP	11.21	□□□□□ -0.61
COPG1-210	ENST00000515725	TAOK2	Q9UL54	1235 aa		11.21	□□□□□ -0.61
COPG1-210	ENST00000515725	PALLD	Q8WX93	1383 aa		11.21	□□□□□ -0.61
COPG1-210	ENST00000515725	IGKV5-2	P06315	115 aa		11.21	□□□□□ -0.62
COPG1-210	ENST00000515725	CWC25	Q9NXE8	425 aa	Predicted RBP	11.21	□□□□□ -0.62
COPG1-210	ENST00000515725	TFCP2L1	Q9NZI6	479 aa		11.21	□□□□□ -0.62
COPG1-210	ENST00000515725	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.21	□□□□□ -0.62
COPG1-210	ENST00000515725	NDUFB9	Q9Y6M9	179 aa		11.21	□□□□□ -0.62
COPG1-210	ENST00000515725	UPF2	Q9HAU5	1272 aa	Known RBP	11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	RFC4	P35249	363 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	FAM196A	Q6ZSG2	479 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	THRAP3	Q9Y2W1	955 aa	Known RBP	11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	NEURL1B	A8MQ27	555 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	GCKR	Q14397	625 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	EPHA10	Q5JZY3	1008 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	METTL22	Q9BUU2	404 aa	Predicted RBP	11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	CCDC87	Q9NVE4	849 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	BABAM1	Q9NWV8	329 aa		11.2	□□□□□ -0.62
COPG1-210	ENST00000515725	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-210	ENST00000515725	IFIT2	P09913	472 aa	Known RBP	11.19	□□□□□ -0.62
COPG1-210	ENST00000515725	AACS	Q86V21	672 aa		11.19	□□□□□ -0.62
COPG1-210	ENST00000515725	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.19	□□□□□ -0.62
COPG1-210	ENST00000515725	ANKRD44	Q8N8A2	993 aa		11.19	□□□□□ -0.62
COPG1-210	ENST00000515725	LRRCC1	Q9C099	1032 aa		11.19	□□□□□ -0.62
COPG1-210	ENST00000515725	CCDC57	Q2TAC2	916 aa		11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	PLBD2	Q8NHP8	589 aa		11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	HOXB7	P09629	217 aa		11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	CYP19A1	P11511	503 aa	Predicted RBP	11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	CNNM1	Q9NRU3	951 aa		11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	ADCY9	O60503	1353 aa		11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	SF3B2	Q13435	895 aa	Known RBP	11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	USPL1	Q5W0Q7	1092 aa		11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	NOL8	Q76FK4	1167 aa	Known RBP	11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	DNAJC2	Q99543	621 aa	Known RBP	11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	RTCB	Q9Y3I0	505 aa	Known RBP	11.18	□□□□□ -0.62
COPG1-210	ENST00000515725	ALS2	Q96Q42	1657 aa		11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	SMARCC1	Q92922	1105 aa	Predicted RBP	11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	KDM2B	Q8NHM5	1336 aa		11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	SNAP23	O00161	211 aa		11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	CLASRP	Q8N2M8	674 aa	Known RBP	11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	SOS1	Q07889	1333 aa	Predicted RBP	11.17	□□□□□ -0.62
COPG1-210	ENST00000515725	SEC24B	O95487	1268 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	NKX1-1	Q15270	411 aa	Predicted RBP	11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	ZNF772	Q68DY9	489 aa	Predicted RBP	11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	SNRK	Q9NRH2	765 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	FRAT2	O75474	233 aa	Predicted RBP	11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	ATP8B2	P98198	1209 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	POTEA	Q6S8J7	498 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	BARGIN	Q6ZT62	677 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	LINC00116	Q8NCU8	138 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	GCC1	Q96CN9	775 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	BOLA2	Q9H3K6	86 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	RBM6	P78332	1123 aa	Known RBP	11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	EN1	Q05925	392 aa	Predicted RBP	11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	DEFB132	Q7Z7B7	95 aa		11.16	□□□□□ -0.62
COPG1-210	ENST00000515725	BCL9L	Q86UU0	1499 aa		11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	IRS4	O14654	1257 aa	Predicted RBP	11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	TIMM10	P62072	90 aa		11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	HDAC1	Q13547	482 aa	Predicted RBP	11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	FOXD4L1	Q9NU39	408 aa		11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	LRP6	O75581	1613 aa		11.15	□□□□□ -0.62
COPG1-210	ENST00000515725	JAG2	Q9Y219	1238 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	TCIRG1	Q13488	830 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	TRAPPC3L	Q5T215	181 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	LDHAL6A	Q6ZMR3	332 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	RHPN1	Q8TCX5	695 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	MPHOSPH8	Q99549	860 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	PUS3	Q9BZE2	481 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	NCAPD2	Q15021	1401 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	KCNJ4	P48050	445 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	NUCB1	Q02818	461 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	IFIT5	Q13325	482 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	SETDB2	Q96T68	719 aa		11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-210	ENST00000515725	ALDH1L1	O75891	902 aa		11.13	□□□□□ -0.63
COPG1-210	ENST00000515725	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
COPG1-210	ENST00000515725	EDC3	Q96F86	508 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-210	ENST00000515725	DCTPP1	Q9H773	170 aa		11.13	□□□□□ -0.63
COPG1-210	ENST00000515725	MARF1	Q9Y4F3	1742 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-210	ENST00000515725	TAF5L	O75529	589 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms