RNA–Protein interactions for RNA: ENST00000515410.1

RAB3A-204, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-204ENST00000515410 ZNF790Q6PG37 636 aa17.98■□□□□ 0.47
RAB3A-204ENST00000515410 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
RAB3A-204ENST00000515410 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
RAB3A-204ENST00000515410 ITGBL1O95965 494 aaPredicted RBP17.97■□□□□ 0.47
RAB3A-204ENST00000515410 PDE6BP35913 854 aa17.97■□□□□ 0.47
RAB3A-204ENST00000515410 MLLT1Q03111 559 aaPredicted RBP17.97■□□□□ 0.47
RAB3A-204ENST00000515410 BRIP1Q9BX63 1249 aa17.97■□□□□ 0.47
RAB3A-204ENST00000515410 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
RAB3A-204ENST00000515410 DICER1Q9UPY3 1922 aaKnown RBP17.97■□□□□ 0.47
RAB3A-204ENST00000515410 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
RAB3A-204ENST00000515410 TEX13AQ9BXU3 409 aaPredicted RBP17.96■□□□□ 0.47
RAB3A-204ENST00000515410 FER1L6Q2WGJ9 1857 aa17.96■□□□□ 0.47
RAB3A-204ENST00000515410 RASSF10A6NK89 507 aa17.95■□□□□ 0.46
RAB3A-204ENST00000515410 MAP2K1Q02750 393 aaPredicted RBP17.95■□□□□ 0.46
RAB3A-204ENST00000515410 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
RAB3A-204ENST00000515410 PLEKHF1Q96S99 279 aa17.95■□□□□ 0.46
RAB3A-204ENST00000515410 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
RAB3A-204ENST00000515410 BTBD11A6QL63 1104 aa17.94■□□□□ 0.46
RAB3A-204ENST00000515410 STARD3NLO95772 234 aa17.94■□□□□ 0.46
RAB3A-204ENST00000515410 NEFMP07197 916 aa17.94■□□□□ 0.46
RAB3A-204ENST00000515410 RGS19P49795 217 aa17.94■□□□□ 0.46
RAB3A-204ENST00000515410 ZNF496Q96IT1 587 aaPredicted RBP17.94■□□□□ 0.46
RAB3A-204ENST00000515410 HEG1Q9ULI3 1381 aa17.93■□□□□ 0.46
RAB3A-204ENST00000515410 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
RAB3A-204ENST00000515410 DEFB115Q30KQ5 88 aa17.93■□□□□ 0.46
RAB3A-204ENST00000515410 SOGA3Q5TF21 947 aa17.93■□□□□ 0.46
RAB3A-204ENST00000515410 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
RAB3A-204ENST00000515410 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
RAB3A-204ENST00000515410 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
RAB3A-204ENST00000515410 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
RAB3A-204ENST00000515410 MCM10Q7L590 875 aa17.92■□□□□ 0.46
RAB3A-204ENST00000515410 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
RAB3A-204ENST00000515410 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
RAB3A-204ENST00000515410 COL11A2P13942 1736 aaPredicted RBP17.92■□□□□ 0.46
RAB3A-204ENST00000515410 SCN4AP35499 1836 aa17.91■□□□□ 0.46
RAB3A-204ENST00000515410 A0A087WZG4 1122 aa17.91■□□□□ 0.46
RAB3A-204ENST00000515410 CCDC85CA6NKD9 419 aa17.91■□□□□ 0.46
RAB3A-204ENST00000515410 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
RAB3A-204ENST00000515410 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
RAB3A-204ENST00000515410 STYK1Q6J9G0 422 aa17.91■□□□□ 0.46
RAB3A-204ENST00000515410 PRPF40BQ6NWY9 871 aaKnown RBP17.91■□□□□ 0.46
RAB3A-204ENST00000515410 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
RAB3A-204ENST00000515410 CCDC24Q8N4L8 307 aa17.9■□□□□ 0.46
RAB3A-204ENST00000515410 HACL1Q9UJ83 578 aa17.9■□□□□ 0.46
RAB3A-204ENST00000515410 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
RAB3A-204ENST00000515410 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
RAB3A-204ENST00000515410 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
RAB3A-204ENST00000515410 DLG5Q8TDM6 1919 aa17.89■□□□□ 0.45
RAB3A-204ENST00000515410 KCNQ3O43525 872 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 SRGNP10124 158 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 EPHX2P34913 555 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 DCTN1Q14203 1278 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 NFE2L2Q16236 605 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
RAB3A-204ENST00000515410 CNTROBQ8N137 903 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 ABT1Q9ULW3 272 aaKnown RBP17.88■□□□□ 0.45
RAB3A-204ENST00000515410 ADAMTSL1Q8N6G6 1762 aa17.88■□□□□ 0.45
RAB3A-204ENST00000515410 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
RAB3A-204ENST00000515410 CNBD1Q8NA66 436 aa17.87■□□□□ 0.45
RAB3A-204ENST00000515410 ZNF541Q9H0D2 1346 aa17.87■□□□□ 0.45
RAB3A-204ENST00000515410 MAP1SQ66K74 1059 aaPredicted RBP17.86■□□□□ 0.45
RAB3A-204ENST00000515410 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
RAB3A-204ENST00000515410 MASTLQ96GX5 879 aa17.86■□□□□ 0.45
RAB3A-204ENST00000515410 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
RAB3A-204ENST00000515410 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
RAB3A-204ENST00000515410 SCN7AQ01118 1682 aa17.85■□□□□ 0.45
RAB3A-204ENST00000515410 CCDC93Q567U6 631 aa17.85■□□□□ 0.45
RAB3A-204ENST00000515410 PNISRQ8TF01 805 aaKnown RBP17.85■□□□□ 0.45
RAB3A-204ENST00000515410 BEGAINQ9BUH8 593 aa17.85■□□□□ 0.45
RAB3A-204ENST00000515410 MAPK8IP3Q9UPT6 1336 aa17.85■□□□□ 0.45
RAB3A-204ENST00000515410 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
RAB3A-204ENST00000515410 THSD7BQ9C0I4 1608 aa17.84■□□□□ 0.45
RAB3A-204ENST00000515410 NPHP1O15259 732 aa17.84■□□□□ 0.45
RAB3A-204ENST00000515410 A1BGP04217 495 aa17.84■□□□□ 0.45
RAB3A-204ENST00000515410 ST5P78524 1137 aa17.84■□□□□ 0.45
RAB3A-204ENST00000515410 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
RAB3A-204ENST00000515410 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
RAB3A-204ENST00000515410 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
RAB3A-204ENST00000515410 RNF123Q5XPI4 1314 aa17.83■□□□□ 0.44
RAB3A-204ENST00000515410 FKBP4Q02790 459 aaKnown RBP eCLIP17.83■□□□□ 0.44
RAB3A-204ENST00000515410 CAPNS2Q96L46 248 aa17.83■□□□□ 0.44
RAB3A-204ENST00000515410 ZNF277Q9NRM2 450 aaPredicted RBP17.83■□□□□ 0.44
RAB3A-204ENST00000515410 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
RAB3A-204ENST00000515410 ECE1P42892 770 aa17.82■□□□□ 0.44
RAB3A-204ENST00000515410 DDX21Q9NR30 783 aaKnown RBP eCLIP17.82■□□□□ 0.44
RAB3A-204ENST00000515410 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
RAB3A-204ENST00000515410 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
RAB3A-204ENST00000515410 FZD9O00144 591 aa17.8■□□□□ 0.44
RAB3A-204ENST00000515410 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
RAB3A-204ENST00000515410 GPC2Q8N158 579 aa17.8■□□□□ 0.44
RAB3A-204ENST00000515410 GPR101Q96P66 508 aaPredicted RBP17.8■□□□□ 0.44
RAB3A-204ENST00000515410 MIS18AQ9NYP9 233 aa17.8■□□□□ 0.44
RAB3A-204ENST00000515410 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
RAB3A-204ENST00000515410 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
RAB3A-204ENST00000515410 NPR1P16066 1061 aa17.79■□□□□ 0.44
RAB3A-204ENST00000515410 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
RAB3A-204ENST00000515410 RIPK4P57078 832 aa17.79■□□□□ 0.44
RAB3A-204ENST00000515410 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
RAB3A-204ENST00000515410 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
RAB3A-204ENST00000515410 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms