RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 IFIT3O14879 490 aaKnown RBP18.59■□□□□ 0.57
TRIM41-207ENST00000515223 FBXO31Q5XUX0 539 aaPredicted RBP18.59■□□□□ 0.57
TRIM41-207ENST00000515223 ANAPC15P60006 121 aa18.59■□□□□ 0.57
TRIM41-207ENST00000515223 C8orf76Q96K31 380 aa18.59■□□□□ 0.57
TRIM41-207ENST00000515223 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
TRIM41-207ENST00000515223 LRRFIP2Q9Y608 721 aaKnown RBP18.59■□□□□ 0.57
TRIM41-207ENST00000515223 KIF14Q15058 1648 aa18.59■□□□□ 0.57
TRIM41-207ENST00000515223 IDI1Q13907 227 aa18.58■□□□□ 0.57
TRIM41-207ENST00000515223 NLRP5P59047 1200 aa18.58■□□□□ 0.57
TRIM41-207ENST00000515223 CBX1P83916 185 aa18.58■□□□□ 0.57
TRIM41-207ENST00000515223 NBPF6Q5VWK0 638 aa18.58■□□□□ 0.57
TRIM41-207ENST00000515223 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.57
TRIM41-207ENST00000515223 NBPF4Q96M43 638 aa18.58■□□□□ 0.57
TRIM41-207ENST00000515223 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.57
TRIM41-207ENST00000515223 KIF5BP33176 963 aa18.58■□□□□ 0.56
TRIM41-207ENST00000515223 CLCN1P35523 988 aa18.58■□□□□ 0.56
TRIM41-207ENST00000515223 PDE4BQ07343 736 aa18.58■□□□□ 0.56
TRIM41-207ENST00000515223 CAMK4Q16566 473 aa18.58■□□□□ 0.56
TRIM41-207ENST00000515223 FAM177A1Q8N128 213 aaPredicted RBP18.58■□□□□ 0.56
TRIM41-207ENST00000515223 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
TRIM41-207ENST00000515223 ARHGAP29Q52LW3 1261 aa18.57■□□□□ 0.56
TRIM41-207ENST00000515223 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
TRIM41-207ENST00000515223 DRC1Q96MC2 740 aa18.57■□□□□ 0.56
TRIM41-207ENST00000515223 GOLGA6L7A0A1B0GV03 622 aa18.57■□□□□ 0.56
TRIM41-207ENST00000515223 CFAP100Q494V2 611 aa18.57■□□□□ 0.56
TRIM41-207ENST00000515223 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
TRIM41-207ENST00000515223 CETN1Q12798 172 aa18.57■□□□□ 0.56
TRIM41-207ENST00000515223 LEKR1Q6ZMV7 388 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
TRIM41-207ENST00000515223 SPA17Q15506 151 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 CCDC82Q8N4S0 544 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 CENPHQ9H3R5 247 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 SH2B1Q9NRF2 756 aaPredicted RBP18.56■□□□□ 0.56
TRIM41-207ENST00000515223 GOLGA8AA7E2F4 631 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 CACNA2D4Q7Z3S7 1137 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 HDAC9Q9UKV0 1011 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 RLBP1P12271 317 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 LARP6Q9BRS8 491 aaKnown RBP18.56■□□□□ 0.56
TRIM41-207ENST00000515223 GSTO1P78417 241 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 USP25Q9UHP3 1055 aa18.56■□□□□ 0.56
TRIM41-207ENST00000515223 ZSCAN23Q3MJ62 389 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 EIF3JO75822 258 aaKnown RBP18.55■□□□□ 0.56
TRIM41-207ENST00000515223 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 SNRPA1P09661 255 aaKnown RBP18.55■□□□□ 0.56
TRIM41-207ENST00000515223 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 FILIP1Q7Z7B0 1213 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 ANKRD24Q8TF21 1146 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 ZMYND15Q9H091 742 aa18.55■□□□□ 0.56
TRIM41-207ENST00000515223 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 TRAF1Q13077 416 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 CCDC152Q4G0S7 254 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 STXBP4Q6ZWJ1 553 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
TRIM41-207ENST00000515223 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 FERMT3Q86UX7 667 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 RRAGDQ9NQL2 400 aaPredicted RBP18.54■□□□□ 0.56
TRIM41-207ENST00000515223 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
TRIM41-207ENST00000515223 SCAND2PQ9GZW5 306 aaPredicted RBP18.54■□□□□ 0.56
TRIM41-207ENST00000515223 OGFOD1Q8N543 542 aa18.54■□□□□ 0.56
TRIM41-207ENST00000515223 F6X3S4 739 aa18.53■□□□□ 0.56
TRIM41-207ENST00000515223 FLIIQ13045 1269 aa18.53■□□□□ 0.56
TRIM41-207ENST00000515223 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
TRIM41-207ENST00000515223 PTPRCP08575 1304 aa18.53■□□□□ 0.56
TRIM41-207ENST00000515223 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
TRIM41-207ENST00000515223 NUCB1Q02818 461 aa18.53■□□□□ 0.56
TRIM41-207ENST00000515223 UQCRFS1P1P0C7P4 283 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 LIG1P18858 919 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 KLHL40Q2TBA0 621 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 PPP4R3BQ5MIZ7 849 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 MAP3K2Q9Y2U5 619 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 CCDC148Q8NFR7 591 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 CALML4Q96GE6 196 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 SETDB2Q96T68 719 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 FAM135AQ9P2D6 1515 aa18.52■□□□□ 0.56
TRIM41-207ENST00000515223 KLHL10Q6JEL2 608 aa18.52■□□□□ 0.55
TRIM41-207ENST00000515223 CRNKL1Q9BZJ0 848 aaKnown RBP18.52■□□□□ 0.55
TRIM41-207ENST00000515223 CLEC11AQ9Y240 323 aa18.52■□□□□ 0.55
TRIM41-207ENST00000515223 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.55
TRIM41-207ENST00000515223 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.55
TRIM41-207ENST00000515223 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.55
TRIM41-207ENST00000515223 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.55
TRIM41-207ENST00000515223 AMPD3Q01432 767 aa18.51■□□□□ 0.55
TRIM41-207ENST00000515223 KIAA0754O94854 1291 aa18.51■□□□□ 0.55
TRIM41-207ENST00000515223 EVI5LQ96CN4 794 aa18.51■□□□□ 0.55
TRIM41-207ENST00000515223 SAMM50Q9Y512 469 aa18.51■□□□□ 0.55
TRIM41-207ENST00000515223 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
TRIM41-207ENST00000515223 UBE3BQ7Z3V4 1068 aa18.51■□□□□ 0.55
TRIM41-207ENST00000515223 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
TRIM41-207ENST00000515223 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
TRIM41-207ENST00000515223 ZGPATQ8N5A5 531 aaKnown RBP18.5■□□□□ 0.55
TRIM41-207ENST00000515223 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
TRIM41-207ENST00000515223 POLD1P28340 1107 aa18.5■□□□□ 0.55
TRIM41-207ENST00000515223 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-207ENST00000515223 CCDC183Q5T5S1 534 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms