RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 SAMD5Q5TGI4 173 aa9.23□□□□□ -0.93
PHF3-211ENST00000514822 ALDH16A1Q8IZ83 802 aa9.23□□□□□ -0.93
PHF3-211ENST00000514822 SVOPQ8N4V2 548 aa9.23□□□□□ -0.93
PHF3-211ENST00000514822 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
PHF3-211ENST00000514822 DCDC2BA2VCK2 349 aa9.22□□□□□ -0.93
PHF3-211ENST00000514822 KHNYNO15037 678 aaKnown RBP9.22□□□□□ -0.93
PHF3-211ENST00000514822 FOXO3O43524 673 aa9.22□□□□□ -0.93
PHF3-211ENST00000514822 FAM157BP0CG42 384 aa9.22□□□□□ -0.93
PHF3-211ENST00000514822 WEE1P30291 646 aa9.22□□□□□ -0.93
PHF3-211ENST00000514822 ZNF385CQ66K41 422 aaPredicted RBP9.22□□□□□ -0.93
PHF3-211ENST00000514822 LRRC69Q6ZNQ3 347 aa9.22□□□□□ -0.93
PHF3-211ENST00000514822 C7orf43Q8WVR3 580 aa9.22□□□□□ -0.93
PHF3-211ENST00000514822 MAPTP10636 758 aaKnown RBP9.21□□□□□ -0.94
PHF3-211ENST00000514822 STK32AQ8WU08 396 aa9.21□□□□□ -0.94
PHF3-211ENST00000514822 ANKIB1Q9P2G1 1089 aa9.21□□□□□ -0.94
PHF3-211ENST00000514822 BMP4P12644 408 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 TNP2Q05952 138 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 HIF1AQ16665 826 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 LYPD4Q6UWN0 246 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 VTI1AQ96AJ9 217 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 NGLY1Q96IV0 654 aa9.2□□□□□ -0.94
PHF3-211ENST00000514822 CTBSQ01459 385 aa9.19□□□□□ -0.94
PHF3-211ENST00000514822 MAP3K10Q02779 954 aa9.19□□□□□ -0.94
PHF3-211ENST00000514822 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
PHF3-211ENST00000514822 TIMELESSQ9UNS1 1208 aa9.19□□□□□ -0.94
PHF3-211ENST00000514822 PPP1R15AO75807 674 aaPredicted RBP9.18□□□□□ -0.94
PHF3-211ENST00000514822 CELA2BP08218 269 aaPredicted RBP9.18□□□□□ -0.94
PHF3-211ENST00000514822 FAM69CQ0P6D2 419 aa9.18□□□□□ -0.94
PHF3-211ENST00000514822 RTN1Q16799 776 aa9.18□□□□□ -0.94
PHF3-211ENST00000514822 FAM182BQ5T319 152 aa9.18□□□□□ -0.94
PHF3-211ENST00000514822 KLRG1Q96E93 195 aa9.18□□□□□ -0.94
PHF3-211ENST00000514822 HSH2DQ96JZ2 352 aa9.18□□□□□ -0.94
PHF3-211ENST00000514822 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
PHF3-211ENST00000514822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.94
PHF3-211ENST00000514822 EFSO43281 561 aa9.17□□□□□ -0.94
PHF3-211ENST00000514822 LAMC2Q13753 1193 aa9.17□□□□□ -0.94
PHF3-211ENST00000514822 ACDQ96AP0 544 aa9.17□□□□□ -0.94
PHF3-211ENST00000514822 SUSD3Q96L08 255 aa9.17□□□□□ -0.94
PHF3-211ENST00000514822 PRIMPOLQ96LW4 560 aa9.17□□□□□ -0.94
PHF3-211ENST00000514822 PRMT3O60678 531 aa9.16□□□□□ -0.94
PHF3-211ENST00000514822 BCRP11274 1271 aa9.16□□□□□ -0.94
PHF3-211ENST00000514822 CD33P20138 364 aa9.16□□□□□ -0.94
PHF3-211ENST00000514822 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
PHF3-211ENST00000514822 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
PHF3-211ENST00000514822 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
PHF3-211ENST00000514822 C2CD2LO14523 706 aa9.15□□□□□ -0.94
PHF3-211ENST00000514822 ARHGEF15O94989 841 aa9.15□□□□□ -0.94
PHF3-211ENST00000514822 ZNF280CQ8ND82 737 aa9.15□□□□□ -0.94
PHF3-211ENST00000514822 LRRC4BQ9NT99 713 aa9.15□□□□□ -0.94
PHF3-211ENST00000514822 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
PHF3-211ENST00000514822 GOLGA6L1Q8N7Z2 621 aa9.14□□□□□ -0.95
PHF3-211ENST00000514822 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
PHF3-211ENST00000514822 CEP63Q96MT8 703 aa9.14□□□□□ -0.95
PHF3-211ENST00000514822 BRD7Q9NPI1 651 aa9.14□□□□□ -0.95
PHF3-211ENST00000514822 HCN2Q9UL51 889 aa9.14□□□□□ -0.95
PHF3-211ENST00000514822 SUPT5HO00267 1087 aaKnown RBP9.13□□□□□ -0.95
PHF3-211ENST00000514822 ARAFP10398 606 aa9.13□□□□□ -0.95
PHF3-211ENST00000514822 OCLNQ16625 522 aa9.13□□□□□ -0.95
PHF3-211ENST00000514822 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
PHF3-211ENST00000514822 ADAMTS8Q9UP79 889 aa9.13□□□□□ -0.95
PHF3-211ENST00000514822 TGFBR3LH3BV60 316 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 OIP5O43482 229 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 IER5Q5VY09 327 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 BTLAQ7Z6A9 289 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 MYO19Q96H55 970 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 QTRT2Q9H974 415 aaKnown RBP9.12□□□□□ -0.95
PHF3-211ENST00000514822 AVENQ9NQS1 362 aaPredicted RBP9.12□□□□□ -0.95
PHF3-211ENST00000514822 CXXC1Q9P0U4 656 aaPredicted RBP9.12□□□□□ -0.95
PHF3-211ENST00000514822 GGA1Q9UJY5 639 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 PRR12Q9ULL5 1215 aa9.12□□□□□ -0.95
PHF3-211ENST00000514822 TYRO3Q06418 890 aa9.11□□□□□ -0.95
PHF3-211ENST00000514822 SFSWAPQ12872 951 aaKnown RBP9.11□□□□□ -0.95
PHF3-211ENST00000514822 DGKZQ13574 1117 aa9.11□□□□□ -0.95
PHF3-211ENST00000514822 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
PHF3-211ENST00000514822 MARSP56192 900 aaKnown RBP9.1□□□□□ -0.95
PHF3-211ENST00000514822 KCNQ4P56696 695 aa9.1□□□□□ -0.95
PHF3-211ENST00000514822 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
PHF3-211ENST00000514822 GALNT6Q8NCL4 622 aa9.1□□□□□ -0.95
PHF3-211ENST00000514822 COL26A1Q96A83 441 aa9.1□□□□□ -0.95
PHF3-211ENST00000514822 KLK14Q9P0G3 267 aa9.1□□□□□ -0.95
PHF3-211ENST00000514822 KCNH4Q9UQ05 1017 aa9.1□□□□□ -0.95
PHF3-211ENST00000514822 DNMT3AQ9Y6K1 912 aaPredicted RBP9.1□□□□□ -0.95
PHF3-211ENST00000514822 ADH6P28332 368 aa9.09□□□□□ -0.95
PHF3-211ENST00000514822 C11orf91Q3C1V1 193 aa9.09□□□□□ -0.95
PHF3-211ENST00000514822 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
PHF3-211ENST00000514822 EDARADDQ8WWZ3 215 aa9.09□□□□□ -0.95
PHF3-211ENST00000514822 ARID3AQ99856 593 aa9.09□□□□□ -0.95
PHF3-211ENST00000514822 NEURL1BA8MQ27 555 aa9.08□□□□□ -0.96
PHF3-211ENST00000514822 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
PHF3-211ENST00000514822 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
PHF3-211ENST00000514822 MKNK1Q9BUB5 465 aa9.08□□□□□ -0.96
PHF3-211ENST00000514822 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
PHF3-211ENST00000514822 RNF225M0QZC1 329 aaPredicted RBP9.07□□□□□ -0.96
PHF3-211ENST00000514822 EPB42P16452 691 aa9.07□□□□□ -0.96
PHF3-211ENST00000514822 ATP2B4P23634 1241 aa9.07□□□□□ -0.96
PHF3-211ENST00000514822 NEUROD1Q13562 356 aa9.07□□□□□ -0.96
PHF3-211ENST00000514822 DMGDHQ9UI17 866 aaKnown RBP9.07□□□□□ -0.96
PHF3-211ENST00000514822 LRFN2Q9ULH4 789 aa9.07□□□□□ -0.96
PHF3-211ENST00000514822 IDH3AP50213 366 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms