RNA–Protein interactions for RNA: ENST00000513942.5

SGCA-210, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-210ENST00000513942 BCORQ6W2J9 1755 aa19.79■□□□□ 0.76
SGCA-210ENST00000513942 U2AF1L5P0DN76 240 aaPredicted RBP19.78■□□□□ 0.76
SGCA-210ENST00000513942 U2AF1Q01081 240 aaKnown RBP eCLIP19.78■□□□□ 0.76
SGCA-210ENST00000513942 PRR5LQ6MZQ0 368 aa19.78■□□□□ 0.76
SGCA-210ENST00000513942 CCDC24Q8N4L8 307 aa19.78■□□□□ 0.76
SGCA-210ENST00000513942 TAOK3Q9H2K8 898 aa19.78■□□□□ 0.76
SGCA-210ENST00000513942 ZNF330Q9Y3S2 320 aaPredicted RBP19.78■□□□□ 0.76
SGCA-210ENST00000513942 CHADLQ6NUI6 762 aa19.77■□□□□ 0.76
SGCA-210ENST00000513942 CREBZFQ9NS37 354 aa19.77■□□□□ 0.76
SGCA-210ENST00000513942 HEG1Q9ULI3 1381 aa19.77■□□□□ 0.76
SGCA-210ENST00000513942 LTBP3Q9NS15 1303 aa19.76■□□□□ 0.75
SGCA-210ENST00000513942 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
SGCA-210ENST00000513942 MKRN1Q9UHC7 482 aaKnown RBP19.76■□□□□ 0.75
SGCA-210ENST00000513942 SCN4AP35499 1836 aa19.75■□□□□ 0.75
SGCA-210ENST00000513942 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
SGCA-210ENST00000513942 ZNF496Q96IT1 587 aaPredicted RBP19.75■□□□□ 0.75
SGCA-210ENST00000513942 TBC1D2BQ9UPU7 963 aa19.75■□□□□ 0.75
SGCA-210ENST00000513942 POTEIP0CG38 1075 aa19.74■□□□□ 0.75
SGCA-210ENST00000513942 POTEJP0CG39 1038 aa19.74■□□□□ 0.75
SGCA-210ENST00000513942 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
SGCA-210ENST00000513942 NCBP3Q53F19 620 aaKnown RBP19.74■□□□□ 0.75
SGCA-210ENST00000513942 CNBD1Q8NA66 436 aa19.74■□□□□ 0.75
SGCA-210ENST00000513942 NPHP1O15259 732 aa19.73■□□□□ 0.75
SGCA-210ENST00000513942 DDNO94850 711 aaPredicted RBP19.73■□□□□ 0.75
SGCA-210ENST00000513942 TEFQ10587 303 aa19.73■□□□□ 0.75
SGCA-210ENST00000513942 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
SGCA-210ENST00000513942 CNKSR1Q969H4 720 aa19.73■□□□□ 0.75
SGCA-210ENST00000513942 TEX13AQ9BXU3 409 aaPredicted RBP19.73■□□□□ 0.75
SGCA-210ENST00000513942 NEFMP07197 916 aa19.72■□□□□ 0.75
SGCA-210ENST00000513942 ST5P78524 1137 aa19.72■□□□□ 0.75
SGCA-210ENST00000513942 STYK1Q6J9G0 422 aa19.72■□□□□ 0.75
SGCA-210ENST00000513942 PRPF40BQ6NWY9 871 aaKnown RBP19.72■□□□□ 0.75
SGCA-210ENST00000513942 SOGA3Q5TF21 947 aa19.71■□□□□ 0.75
SGCA-210ENST00000513942 NPM2Q86SE8 214 aaKnown RBP19.71■□□□□ 0.75
SGCA-210ENST00000513942 SETDB2Q96T68 719 aa19.71■□□□□ 0.75
SGCA-210ENST00000513942 CNTNAP1P78357 1384 aa19.7■□□□□ 0.74
SGCA-210ENST00000513942 CAMTA2O94983 1202 aa19.7■□□□□ 0.74
SGCA-210ENST00000513942 SRGNP10124 158 aa19.7■□□□□ 0.74
SGCA-210ENST00000513942 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
SGCA-210ENST00000513942 MAPK8IP3Q9UPT6 1336 aa19.7■□□□□ 0.74
SGCA-210ENST00000513942 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 GNAT3A8MTJ3 354 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 IL17REQ8NFR9 667 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 MASTLQ96GX5 879 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 FMNL2Q96PY5 1086 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 PASKQ96RG2 1323 aa19.69■□□□□ 0.74
SGCA-210ENST00000513942 APAF1O14727 1248 aa19.68■□□□□ 0.74
SGCA-210ENST00000513942 FOXN1O15353 648 aa19.68■□□□□ 0.74
SGCA-210ENST00000513942 A1BGP04217 495 aa19.68■□□□□ 0.74
SGCA-210ENST00000513942 LDHDQ86WU2 507 aa19.68■□□□□ 0.74
SGCA-210ENST00000513942 DZIP3Q86Y13 1208 aaKnown RBP19.67■□□□□ 0.74
SGCA-210ENST00000513942 L3MBTL3Q96JM7 780 aaPredicted RBP19.67■□□□□ 0.74
SGCA-210ENST00000513942 ADAMTSL1Q8N6G6 1762 aa19.66■□□□□ 0.74
SGCA-210ENST00000513942 TAF1DQ9H5J8 278 aaPredicted RBP19.66■□□□□ 0.74
SGCA-210ENST00000513942 CCDC93Q567U6 631 aa19.65■□□□□ 0.74
SGCA-210ENST00000513942 PLEKHF1Q96S99 279 aa19.65■□□□□ 0.74
SGCA-210ENST00000513942 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
SGCA-210ENST00000513942 PRDM10Q9NQV6 1147 aa19.65■□□□□ 0.74
SGCA-210ENST00000513942 CEMIPQ8WUJ3 1361 aa19.65■□□□□ 0.74
SGCA-210ENST00000513942 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
SGCA-210ENST00000513942 NBPF5PQ86XG9 351 aaPredicted RBP19.64■□□□□ 0.73
SGCA-210ENST00000513942 AIDAQ96BJ3 306 aa19.64■□□□□ 0.73
SGCA-210ENST00000513942 ZNF541Q9H0D2 1346 aa19.63■□□□□ 0.73
SGCA-210ENST00000513942 KCNQ3O43525 872 aa19.63■□□□□ 0.73
SGCA-210ENST00000513942 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
SGCA-210ENST00000513942 EAPPQ56P03 285 aaPredicted RBP19.63■□□□□ 0.73
SGCA-210ENST00000513942 C7orf43Q8WVR3 580 aa19.63■□□□□ 0.73
SGCA-210ENST00000513942 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
SGCA-210ENST00000513942 ZNF521Q96K83 1311 aa19.62■□□□□ 0.73
SGCA-210ENST00000513942 TMEM88BA6NKF7 163 aa19.62■□□□□ 0.73
SGCA-210ENST00000513942 BTBD11A6QL63 1104 aa19.62■□□□□ 0.73
SGCA-210ENST00000513942 NPR1P16066 1061 aa19.62■□□□□ 0.73
SGCA-210ENST00000513942 PRKAR2BP31323 418 aa19.62■□□□□ 0.73
SGCA-210ENST00000513942 CTCFP49711 727 aaPredicted RBP19.62■□□□□ 0.73
SGCA-210ENST00000513942 VEGFBP49765 207 aa19.62■□□□□ 0.73
SGCA-210ENST00000513942 FKBP4Q02790 459 aaKnown RBP eCLIP19.62■□□□□ 0.73
SGCA-210ENST00000513942 ITGBL1O95965 494 aaPredicted RBP19.61■□□□□ 0.73
SGCA-210ENST00000513942 ZNF277Q9NRM2 450 aaPredicted RBP19.61■□□□□ 0.73
SGCA-210ENST00000513942 HACL1Q9UJ83 578 aa19.61■□□□□ 0.73
SGCA-210ENST00000513942 ZNF652Q9Y2D9 606 aa19.61■□□□□ 0.73
SGCA-210ENST00000513942 USP16Q9Y5T5 823 aa19.61■□□□□ 0.73
SGCA-210ENST00000513942 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
SGCA-210ENST00000513942 CLEC4GQ6UXB4 293 aa19.6■□□□□ 0.73
SGCA-210ENST00000513942 CLEC11AQ9Y240 323 aa19.59■□□□□ 0.73
SGCA-210ENST00000513942 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
SGCA-210ENST00000513942 PRAMEF22A3QJZ6 481 aa19.58■□□□□ 0.72
SGCA-210ENST00000513942 KLRG2A4D1S0 409 aaPredicted RBP19.58■□□□□ 0.72
SGCA-210ENST00000513942 EPHX2P34913 555 aa19.58■□□□□ 0.72
SGCA-210ENST00000513942 TMPOP42166 694 aaKnown RBP19.58■□□□□ 0.72
SGCA-210ENST00000513942 OLFM4Q6UX06 510 aa19.58■□□□□ 0.72
SGCA-210ENST00000513942 WDR63Q8IWG1 891 aa19.58■□□□□ 0.72
SGCA-210ENST00000513942 TPTE2Q6XPS3 522 aa19.57■□□□□ 0.72
SGCA-210ENST00000513942 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
SGCA-210ENST00000513942 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
SGCA-210ENST00000513942 WBP1LQ9NX94 342 aa19.57■□□□□ 0.72
SGCA-210ENST00000513942 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
SGCA-210ENST00000513942 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
SGCA-210ENST00000513942 E9PSI1 815 aa19.56■□□□□ 0.72
SGCA-210ENST00000513942 LBX1P52954 281 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms