RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 CCDC146Q8IYE0 955 aa17.43■□□□□ 0.38
FOXD1-201ENST00000513595 FKBP8Q14318 412 aa17.42■□□□□ 0.38
FOXD1-201ENST00000513595 PRPF38BQ5VTL8 546 aaKnown RBP17.42■□□□□ 0.38
FOXD1-201ENST00000513595 BEGAINQ9BUH8 593 aa17.42■□□□□ 0.38
FOXD1-201ENST00000513595 MCOLN1Q9GZU1 580 aa17.42■□□□□ 0.38
FOXD1-201ENST00000513595 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
FOXD1-201ENST00000513595 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
FOXD1-201ENST00000513595 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
FOXD1-201ENST00000513595 APAF1O14727 1248 aa17.41■□□□□ 0.38
FOXD1-201ENST00000513595 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
FOXD1-201ENST00000513595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.38
FOXD1-201ENST00000513595 DEFB115Q30KQ5 88 aa17.4■□□□□ 0.38
FOXD1-201ENST00000513595 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
FOXD1-201ENST00000513595 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
FOXD1-201ENST00000513595 TM4SF1P30408 202 aa17.39■□□□□ 0.37
FOXD1-201ENST00000513595 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
FOXD1-201ENST00000513595 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
FOXD1-201ENST00000513595 NFKBIEO00221 500 aa17.38■□□□□ 0.37
FOXD1-201ENST00000513595 PHKG2P15735 406 aa17.38■□□□□ 0.37
FOXD1-201ENST00000513595 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
FOXD1-201ENST00000513595 IFNL2Q8IZJ0 200 aa17.38■□□□□ 0.37
FOXD1-201ENST00000513595 USP42Q9H9J4 1324 aaKnown RBP17.38■□□□□ 0.37
FOXD1-201ENST00000513595 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 HMOX1P09601 288 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 CLCN6P51797 869 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 SULT6B1Q6IMI4 303 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 TTLL6Q8N841 843 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 EYA1Q99502 592 aa17.37■□□□□ 0.37
FOXD1-201ENST00000513595 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
FOXD1-201ENST00000513595 ABT1Q9ULW3 272 aaKnown RBP17.36■□□□□ 0.37
FOXD1-201ENST00000513595 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
FOXD1-201ENST00000513595 GRM1Q13255 1194 aa17.35■□□□□ 0.37
FOXD1-201ENST00000513595 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
FOXD1-201ENST00000513595 ZNF521Q96K83 1311 aa17.35■□□□□ 0.37
FOXD1-201ENST00000513595 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
FOXD1-201ENST00000513595 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
FOXD1-201ENST00000513595 SOX10P56693 466 aa17.34■□□□□ 0.37
FOXD1-201ENST00000513595 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
FOXD1-201ENST00000513595 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
FOXD1-201ENST00000513595 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
FOXD1-201ENST00000513595 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
FOXD1-201ENST00000513595 ITGBL1O95965 494 aaPredicted RBP17.33■□□□□ 0.36
FOXD1-201ENST00000513595 DGKZQ13574 1117 aa17.33■□□□□ 0.36
FOXD1-201ENST00000513595 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.36
FOXD1-201ENST00000513595 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
FOXD1-201ENST00000513595 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
FOXD1-201ENST00000513595 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
FOXD1-201ENST00000513595 AEBP1Q8IUX7 1158 aa17.32■□□□□ 0.36
FOXD1-201ENST00000513595 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
FOXD1-201ENST00000513595 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
FOXD1-201ENST00000513595 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
FOXD1-201ENST00000513595 IQCA1LA6NCM1 817 aa17.3■□□□□ 0.36
FOXD1-201ENST00000513595 LHX8Q68G74 356 aa17.3■□□□□ 0.36
FOXD1-201ENST00000513595 WDR63Q8IWG1 891 aa17.3■□□□□ 0.36
FOXD1-201ENST00000513595 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
FOXD1-201ENST00000513595 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
FOXD1-201ENST00000513595 RIPK4P57078 832 aa17.29■□□□□ 0.36
FOXD1-201ENST00000513595 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
FOXD1-201ENST00000513595 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
FOXD1-201ENST00000513595 PHACTR3Q96KR7 559 aa17.29■□□□□ 0.36
FOXD1-201ENST00000513595 H0YIN7 160 aa17.28■□□□□ 0.36
FOXD1-201ENST00000513595 GALR2O43603 387 aaPredicted RBP17.28■□□□□ 0.36
FOXD1-201ENST00000513595 ZPR1O75312 459 aa17.28■□□□□ 0.36
FOXD1-201ENST00000513595 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
FOXD1-201ENST00000513595 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
FOXD1-201ENST00000513595 CAPNS2Q96L46 248 aa17.28■□□□□ 0.36
FOXD1-201ENST00000513595 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
FOXD1-201ENST00000513595 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
FOXD1-201ENST00000513595 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
FOXD1-201ENST00000513595 E9PSI1 815 aa17.27■□□□□ 0.36
FOXD1-201ENST00000513595 NFIXQ14938 502 aa17.27■□□□□ 0.36
FOXD1-201ENST00000513595 INTS5Q6P9B9 1019 aaKnown RBP17.27■□□□□ 0.36
FOXD1-201ENST00000513595 L3MBTL3Q96JM7 780 aaPredicted RBP17.27■□□□□ 0.36
FOXD1-201ENST00000513595 IL16Q14005 1332 aa17.26■□□□□ 0.35
FOXD1-201ENST00000513595 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
FOXD1-201ENST00000513595 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
FOXD1-201ENST00000513595 PHF12Q96QT6 1004 aa17.26■□□□□ 0.35
FOXD1-201ENST00000513595 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
FOXD1-201ENST00000513595 SERPINB2P05120 415 aa17.25■□□□□ 0.35
FOXD1-201ENST00000513595 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
FOXD1-201ENST00000513595 ECE1P42892 770 aa17.25■□□□□ 0.35
FOXD1-201ENST00000513595 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
FOXD1-201ENST00000513595 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
FOXD1-201ENST00000513595 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
FOXD1-201ENST00000513595 C21orf2O43822 256 aa17.24■□□□□ 0.35
FOXD1-201ENST00000513595 CABP4P57796 275 aa17.24■□□□□ 0.35
FOXD1-201ENST00000513595 THSD7BQ9C0I4 1608 aa17.24■□□□□ 0.35
FOXD1-201ENST00000513595 CASP8AP2Q9UKL3 1982 aa17.23■□□□□ 0.35
FOXD1-201ENST00000513595 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
FOXD1-201ENST00000513595 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
FOXD1-201ENST00000513595 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
FOXD1-201ENST00000513595 TRMT2AQ8IZ69 625 aaKnown RBP17.23■□□□□ 0.35
FOXD1-201ENST00000513595 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
FOXD1-201ENST00000513595 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
FOXD1-201ENST00000513595 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
FOXD1-201ENST00000513595 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
FOXD1-201ENST00000513595 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
FOXD1-201ENST00000513595 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
FOXD1-201ENST00000513595 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms