RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 COL15A1P39059 1388 aa11.29□□□□□ -0.6
PROM1-215ENST00000513448 KDM6AO15550 1401 aaPredicted RBP11.29□□□□□ -0.6
PROM1-215ENST00000513448 IFIT2P09913 472 aaKnown RBP11.29□□□□□ -0.6
PROM1-215ENST00000513448 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
PROM1-215ENST00000513448 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 SNRPA1P09661 255 aaKnown RBP11.28□□□□□ -0.6
PROM1-215ENST00000513448 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 EVI5LQ96CN4 794 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
PROM1-215ENST00000513448 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
PROM1-215ENST00000513448 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 METTL22Q9BUU2 404 aaPredicted RBP11.28□□□□□ -0.6
PROM1-215ENST00000513448 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
PROM1-215ENST00000513448 PALD1Q9ULE6 856 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
PROM1-215ENST00000513448 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
PROM1-215ENST00000513448 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.61
PROM1-215ENST00000513448 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
PROM1-215ENST00000513448 LMBRD1Q9NUN5 540 aa11.27□□□□□ -0.61
PROM1-215ENST00000513448 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
PROM1-215ENST00000513448 MEGF6O75095 1541 aa11.27□□□□□ -0.61
PROM1-215ENST00000513448 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 BRD1O95696 1058 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 ZNF445P59923 1031 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 DIAPH3Q9NSV4 1193 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 IGKV5-2P06315 115 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 GCKRQ14397 625 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 KCNB2Q92953 911 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 SUCLG2Q96I99 432 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 TM6SF1Q9BZW5 370 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 ZDHHC9Q9Y397 364 aa11.26□□□□□ -0.61
PROM1-215ENST00000513448 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
PROM1-215ENST00000513448 ZNF496Q96IT1 587 aaPredicted RBP11.25□□□□□ -0.61
PROM1-215ENST00000513448 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
PROM1-215ENST00000513448 PARP4Q9UKK3 1724 aaKnown RBP11.25□□□□□ -0.61
PROM1-215ENST00000513448 MBD3O95983 291 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 AIMP1Q12904 312 aaKnown RBP11.25□□□□□ -0.61
PROM1-215ENST00000513448 PKP1Q13835 747 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 COPS6Q7L5N1 327 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 LRP10Q7Z4F1 713 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 TICAM2Q86XR7 235 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 SNX14Q9Y5W7 946 aa11.25□□□□□ -0.61
PROM1-215ENST00000513448 STRCP1A6NGW2 1772 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 CYP27B1O15528 508 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 SASH1O94885 1247 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 CWC27Q6UX04 472 aaKnown RBP11.24□□□□□ -0.61
PROM1-215ENST00000513448 AACSQ86V21 672 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 XAGE3Q8WTP9 111 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 TTC14Q96N46 770 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 IL25Q9H293 177 aa11.24□□□□□ -0.61
PROM1-215ENST00000513448 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.24□□□□□ -0.61
PROM1-215ENST00000513448 C5P01031 1676 aa11.23□□□□□ -0.61
PROM1-215ENST00000513448 WDR33Q9C0J8 1336 aaKnown RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
PROM1-215ENST00000513448 MAP4K4O95819 1239 aaPredicted RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 CABP4P57796 275 aa11.23□□□□□ -0.61
PROM1-215ENST00000513448 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
PROM1-215ENST00000513448 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
PROM1-215ENST00000513448 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
PROM1-215ENST00000513448 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 ZSCAN31Q96LW9 406 aaPredicted RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 UPF3BQ9BZI7 483 aaKnown RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
PROM1-215ENST00000513448 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
PROM1-215ENST00000513448 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
PROM1-215ENST00000513448 MYL6BP14649 208 aa11.22□□□□□ -0.61
PROM1-215ENST00000513448 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
PROM1-215ENST00000513448 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
PROM1-215ENST00000513448 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
PROM1-215ENST00000513448 RFX7Q2KHR2 1363 aa11.22□□□□□ -0.61
PROM1-215ENST00000513448 WDR17Q8IZU2 1322 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 NECTIN1Q15223 517 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 MYD88Q99836 296 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 PANK2Q9BZ23 570 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
PROM1-215ENST00000513448 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
PROM1-215ENST00000513448 USP16Q9Y5T5 823 aa11.21□□□□□ -0.61
PROM1-215ENST00000513448 PSMA5P28066 241 aa11.21□□□□□ -0.62
PROM1-215ENST00000513448 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.62
PROM1-215ENST00000513448 MAP4K1Q92918 833 aa11.21□□□□□ -0.62
PROM1-215ENST00000513448 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.62
PROM1-215ENST00000513448 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.62
PROM1-215ENST00000513448 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
PROM1-215ENST00000513448 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
PROM1-215ENST00000513448 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
PROM1-215ENST00000513448 RNF20Q5VTR2 975 aa11.2□□□□□ -0.62
PROM1-215ENST00000513448 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms