RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 NUP188Q5SRE5 1749 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
DHFR-206ENST00000513048 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
DHFR-206ENST00000513048 RXRBP28702 533 aa11.84□□□□□ -0.51
DHFR-206ENST00000513048 BEND3Q5T5X7 828 aa11.84□□□□□ -0.51
DHFR-206ENST00000513048 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
DHFR-206ENST00000513048 DNAAF4Q8WXU2 420 aa11.84□□□□□ -0.51
DHFR-206ENST00000513048 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
DHFR-206ENST00000513048 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
DHFR-206ENST00000513048 STARD3NLO95772 234 aa11.83□□□□□ -0.52
DHFR-206ENST00000513048 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
DHFR-206ENST00000513048 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
DHFR-206ENST00000513048 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
DHFR-206ENST00000513048 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
DHFR-206ENST00000513048 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
DHFR-206ENST00000513048 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
DHFR-206ENST00000513048 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
DHFR-206ENST00000513048 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
DHFR-206ENST00000513048 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
DHFR-206ENST00000513048 TTLL7Q6ZT98 887 aa11.82□□□□□ -0.52
DHFR-206ENST00000513048 MEIS3Q99687 375 aa11.82□□□□□ -0.52
DHFR-206ENST00000513048 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
DHFR-206ENST00000513048 IGHDP01880 384 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 USP44Q9H0E7 712 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
DHFR-206ENST00000513048 ZBTB1Q9Y2K1 713 aa11.81□□□□□ -0.52
DHFR-206ENST00000513048 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
DHFR-206ENST00000513048 IGKV5-2P06315 115 aa11.8□□□□□ -0.52
DHFR-206ENST00000513048 LINC00116Q8NCU8 138 aa11.8□□□□□ -0.52
DHFR-206ENST00000513048 METTL22Q9BUU2 404 aaPredicted RBP11.8□□□□□ -0.52
DHFR-206ENST00000513048 SRCIN1Q9C0H9 1055 aa11.8□□□□□ -0.52
DHFR-206ENST00000513048 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
DHFR-206ENST00000513048 IL6STP40189 918 aaPredicted RBP11.79□□□□□ -0.52
DHFR-206ENST00000513048 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
DHFR-206ENST00000513048 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
DHFR-206ENST00000513048 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
DHFR-206ENST00000513048 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
DHFR-206ENST00000513048 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
DHFR-206ENST00000513048 LINS1Q8NG48 757 aa11.79□□□□□ -0.52
DHFR-206ENST00000513048 C1orf115Q9H7X2 142 aa11.79□□□□□ -0.52
DHFR-206ENST00000513048 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
DHFR-206ENST00000513048 KCNQ4P56696 695 aa11.78□□□□□ -0.52
DHFR-206ENST00000513048 CENPQQ7L2Z9 268 aaPredicted RBP11.78□□□□□ -0.52
DHFR-206ENST00000513048 UTYO14607 1347 aa11.78□□□□□ -0.52
DHFR-206ENST00000513048 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
DHFR-206ENST00000513048 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.52
DHFR-206ENST00000513048 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
DHFR-206ENST00000513048 TRIM37O94972 964 aa11.77□□□□□ -0.53
DHFR-206ENST00000513048 GNAI3P08754 354 aa11.77□□□□□ -0.53
DHFR-206ENST00000513048 CWF19L2Q2TBE0 894 aaKnown RBP11.77□□□□□ -0.53
DHFR-206ENST00000513048 MYD88Q99836 296 aa11.77□□□□□ -0.53
DHFR-206ENST00000513048 MAP3K15Q6ZN16 1313 aa11.77□□□□□ -0.53
DHFR-206ENST00000513048 NBPF7P0C2Y1 421 aaPredicted RBP11.76□□□□□ -0.53
DHFR-206ENST00000513048 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
DHFR-206ENST00000513048 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
DHFR-206ENST00000513048 ANKRD44Q8N8A2 993 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 ZBTB3Q9H5J0 574 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
DHFR-206ENST00000513048 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 ANKRD36CQ5JPF3 1778 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 NUP98P52948 1817 aa11.76□□□□□ -0.53
DHFR-206ENST00000513048 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
DHFR-206ENST00000513048 GNAI2P04899 355 aa11.75□□□□□ -0.53
DHFR-206ENST00000513048 GCKRQ14397 625 aa11.75□□□□□ -0.53
DHFR-206ENST00000513048 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
DHFR-206ENST00000513048 RWDD1Q9H446 243 aaPredicted RBP11.75□□□□□ -0.53
DHFR-206ENST00000513048 ERVV-1B6SEH8 477 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 GRM8O00222 908 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 UBTFL1P0CB47 393 aaPredicted RBP11.74□□□□□ -0.53
DHFR-206ENST00000513048 CASP7P55210 303 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 TRIM28Q13263 835 aaKnown RBP11.74□□□□□ -0.53
DHFR-206ENST00000513048 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 HLFQ16534 295 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
DHFR-206ENST00000513048 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 PROM2Q8N271 834 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
DHFR-206ENST00000513048 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
DHFR-206ENST00000513048 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
DHFR-206ENST00000513048 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 COL15A1P39059 1388 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
DHFR-206ENST00000513048 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms