RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
DDR1-269ENST00000512725 MASTLQ96GX5 879 aa21.56■■□□□ 1.04
DDR1-269ENST00000512725 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
DDR1-269ENST00000512725 SRGNP10124 158 aa21.55■■□□□ 1.04
DDR1-269ENST00000512725 VEGFBP49765 207 aa21.55■■□□□ 1.04
DDR1-269ENST00000512725 TAF1DQ9H5J8 278 aaPredicted RBP21.55■■□□□ 1.04
DDR1-269ENST00000512725 PRDM10Q9NQV6 1147 aa21.55■■□□□ 1.04
DDR1-269ENST00000512725 TMEM88BA6NKF7 163 aa21.54■■□□□ 1.04
DDR1-269ENST00000512725 DZIP3Q86Y13 1208 aaKnown RBP21.54■■□□□ 1.04
DDR1-269ENST00000512725 FMNL2Q96PY5 1086 aa21.54■■□□□ 1.04
DDR1-269ENST00000512725 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
DDR1-269ENST00000512725 CAMTA2O94983 1202 aa21.53■■□□□ 1.04
DDR1-269ENST00000512725 PIP4K2AP48426 406 aaPredicted RBP21.53■■□□□ 1.04
DDR1-269ENST00000512725 CCDC93Q567U6 631 aa21.53■■□□□ 1.04
DDR1-269ENST00000512725 AMER1Q5JTC6 1135 aaPredicted RBP21.53■■□□□ 1.04
DDR1-269ENST00000512725 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
DDR1-269ENST00000512725 NBPF5PQ86XG9 351 aaPredicted RBP21.53■■□□□ 1.04
DDR1-269ENST00000512725 PASKQ96RG2 1323 aa21.53■■□□□ 1.04
DDR1-269ENST00000512725 LBX1P52954 281 aa21.52■■□□□ 1.04
DDR1-269ENST00000512725 IL17REQ8NFR9 667 aa21.52■■□□□ 1.04
DDR1-269ENST00000512725 ZNF277Q9NRM2 450 aaPredicted RBP21.52■■□□□ 1.04
DDR1-269ENST00000512725 FAM177BA6PVY3 158 aa21.51■■□□□ 1.03
DDR1-269ENST00000512725 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
DDR1-269ENST00000512725 GAS2L2Q8NHY3 880 aa21.5■■□□□ 1.03
DDR1-269ENST00000512725 L3MBTL3Q96JM7 780 aaPredicted RBP21.5■■□□□ 1.03
DDR1-269ENST00000512725 ZNF541Q9H0D2 1346 aa21.5■■□□□ 1.03
DDR1-269ENST00000512725 SCN4AP35499 1836 aa21.5■■□□□ 1.03
DDR1-269ENST00000512725 BTBD11A6QL63 1104 aa21.48■■□□□ 1.03
DDR1-269ENST00000512725 KCNQ3O43525 872 aa21.48■■□□□ 1.03
DDR1-269ENST00000512725 NPR1P16066 1061 aa21.48■■□□□ 1.03
DDR1-269ENST00000512725 EPHX2P34913 555 aa21.48■■□□□ 1.03
DDR1-269ENST00000512725 FKBP4Q02790 459 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDR1-269ENST00000512725 OLFM4Q6UX06 510 aa21.48■■□□□ 1.03
DDR1-269ENST00000512725 ARFGEF2Q9Y6D5 1785 aa21.47■■□□□ 1.03
DDR1-269ENST00000512725 ITGBL1O95965 494 aaPredicted RBP21.47■■□□□ 1.03
DDR1-269ENST00000512725 DEFB115Q30KQ5 88 aa21.47■■□□□ 1.03
DDR1-269ENST00000512725 MAP1SQ66K74 1059 aaPredicted RBP21.47■■□□□ 1.03
DDR1-269ENST00000512725 ABT1Q9ULW3 272 aaKnown RBP21.47■■□□□ 1.03
DDR1-269ENST00000512725 ZNF652Q9Y2D9 606 aa21.47■■□□□ 1.03
DDR1-269ENST00000512725 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
DDR1-269ENST00000512725 PAXIP1Q6ZW49 1069 aaPredicted RBP21.46■■□□□ 1.03
DDR1-269ENST00000512725 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
DDR1-269ENST00000512725 WBP1LQ9NX94 342 aa21.46■■□□□ 1.03
DDR1-269ENST00000512725 USP16Q9Y5T5 823 aa21.45■■□□□ 1.02
DDR1-269ENST00000512725 BCORQ6W2J9 1755 aa21.45■■□□□ 1.02
DDR1-269ENST00000512725 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
DDR1-269ENST00000512725 GRM1Q13255 1194 aa21.44■■□□□ 1.02
DDR1-269ENST00000512725 TPTE2Q6XPS3 522 aa21.44■■□□□ 1.02
DDR1-269ENST00000512725 PNMA8AQ86V59 439 aaPredicted RBP21.44■■□□□ 1.02
DDR1-269ENST00000512725 RTKN2Q8IZC4 609 aa21.44■■□□□ 1.02
DDR1-269ENST00000512725 C7orf43Q8WVR3 580 aa21.44■■□□□ 1.02
DDR1-269ENST00000512725 NIP7Q9Y221 180 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDR1-269ENST00000512725 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
DDR1-269ENST00000512725 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
DDR1-269ENST00000512725 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
DDR1-269ENST00000512725 IARSP41252 1262 aaKnown RBP21.43■■□□□ 1.02
DDR1-269ENST00000512725 SYNE4Q8N205 404 aa21.43■■□□□ 1.02
DDR1-269ENST00000512725 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
DDR1-269ENST00000512725 HSPA8P11142 646 aaKnown RBP21.42■■□□□ 1.02
DDR1-269ENST00000512725 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
DDR1-269ENST00000512725 WDR33Q9C0J8 1336 aaKnown RBP21.42■■□□□ 1.02
DDR1-269ENST00000512725 RASSF10A6NK89 507 aa21.41■■□□□ 1.02
DDR1-269ENST00000512725 MAP2K1Q02750 393 aaPredicted RBP21.41■■□□□ 1.02
DDR1-269ENST00000512725 FAM161AQ3B820 660 aa21.41■■□□□ 1.02
DDR1-269ENST00000512725 JDP2Q8WYK2 163 aa21.41■■□□□ 1.02
DDR1-269ENST00000512725 ABHD8Q96I13 439 aa21.41■■□□□ 1.02
DDR1-269ENST00000512725 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
DDR1-269ENST00000512725 ALDH1B1P30837 517 aa21.4■■□□□ 1.02
DDR1-269ENST00000512725 SNRPA1P09661 255 aaKnown RBP21.39■■□□□ 1.01
DDR1-269ENST00000512725 LMOD1P29536 600 aaPredicted RBP21.39■■□□□ 1.01
DDR1-269ENST00000512725 EIF6P56537 245 aaKnown RBP21.39■■□□□ 1.01
DDR1-269ENST00000512725 BEGAINQ9BUH8 593 aa21.39■■□□□ 1.01
DDR1-269ENST00000512725 PRKAR2BP31323 418 aa21.38■■□□□ 1.01
DDR1-269ENST00000512725 GPC2Q8N158 579 aa21.38■■□□□ 1.01
DDR1-269ENST00000512725 RTF1Q92541 710 aaKnown RBP21.38■■□□□ 1.01
DDR1-269ENST00000512725 CCDC85CA6NKD9 419 aa21.37■■□□□ 1.01
DDR1-269ENST00000512725 FZD9O00144 591 aa21.37■■□□□ 1.01
DDR1-269ENST00000512725 PHACTR3Q96KR7 559 aa21.37■■□□□ 1.01
DDR1-269ENST00000512725 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
DDR1-269ENST00000512725 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
DDR1-269ENST00000512725 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
DDR1-269ENST00000512725 DDX21Q9NR30 783 aaKnown RBP eCLIP21.36■■□□□ 1.01
DDR1-269ENST00000512725 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
DDR1-269ENST00000512725 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
DDR1-269ENST00000512725 MCM10Q7L590 875 aa21.35■■□□□ 1.01
DDR1-269ENST00000512725 ADAMTSL1Q8N6G6 1762 aa21.35■■□□□ 1.01
DDR1-269ENST00000512725 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
DDR1-269ENST00000512725 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
DDR1-269ENST00000512725 HLFQ16534 295 aa21.34■■□□□ 1.01
DDR1-269ENST00000512725 CAPNS2Q96L46 248 aa21.34■■□□□ 1.01
DDR1-269ENST00000512725 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
DDR1-269ENST00000512725 NBPF26B4DH59 902 aa21.33■■□□□ 1.01
DDR1-269ENST00000512725 CYP4F22Q6NT55 531 aa21.33■■□□□ 1.01
DDR1-269ENST00000512725 NBPF10Q6P3W6 841 aaKnown RBP21.33■■□□□ 1.01
DDR1-269ENST00000512725 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
DDR1-269ENST00000512725 NBPF15Q8N660 670 aa21.33■■□□□ 1.01
DDR1-269ENST00000512725 RPGRQ92834 1020 aaKnown RBP21.33■■□□□ 1.01
DDR1-269ENST00000512725 ECE1P42892 770 aa21.32■■□□□ 1
DDR1-269ENST00000512725 DCTN1Q14203 1278 aa21.32■■□□□ 1
DDR1-269ENST00000512725 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms