RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 A1BGP04217 495 aa17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 AMER1Q5JTC6 1135 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
POLR2J3-216ENST00000511773 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 CAMTA2O94983 1202 aa17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 LBX1P52954 281 aa17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 L3MBTL3Q96JM7 780 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.45
POLR2J3-216ENST00000511773 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 CCDC93Q567U6 631 aa17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 ZNF277Q9NRM2 450 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-216ENST00000511773 ITGBL1O95965 494 aaPredicted RBP17.86■□□□□ 0.45
POLR2J3-216ENST00000511773 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
POLR2J3-216ENST00000511773 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
POLR2J3-216ENST00000511773 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
POLR2J3-216ENST00000511773 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
POLR2J3-216ENST00000511773 FKBP4Q02790 459 aaKnown RBP eCLIP17.85■□□□□ 0.45
POLR2J3-216ENST00000511773 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
POLR2J3-216ENST00000511773 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
POLR2J3-216ENST00000511773 WBP1LQ9NX94 342 aa17.85■□□□□ 0.45
POLR2J3-216ENST00000511773 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 KCNQ3O43525 872 aa17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 EPHX2P34913 555 aa17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 PCGF6Q9BYE7 350 aa17.84■□□□□ 0.45
POLR2J3-216ENST00000511773 NPR1P16066 1061 aa17.83■□□□□ 0.44
POLR2J3-216ENST00000511773 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
POLR2J3-216ENST00000511773 ABT1Q9ULW3 272 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-216ENST00000511773 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 HSPA8P11142 646 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 ABHD8Q96I13 439 aa17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
POLR2J3-216ENST00000511773 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
POLR2J3-216ENST00000511773 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
POLR2J3-216ENST00000511773 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-216ENST00000511773 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
POLR2J3-216ENST00000511773 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
POLR2J3-216ENST00000511773 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-216ENST00000511773 PNMA8AQ86V59 439 aaPredicted RBP17.8■□□□□ 0.44
POLR2J3-216ENST00000511773 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
POLR2J3-216ENST00000511773 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
POLR2J3-216ENST00000511773 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
POLR2J3-216ENST00000511773 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
POLR2J3-216ENST00000511773 NIP7Q9Y221 180 aaKnown RBP eCLIP17.79■□□□□ 0.44
POLR2J3-216ENST00000511773 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
POLR2J3-216ENST00000511773 KIF7Q2M1P5 1343 aa17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 SLC34A2O95436 690 aa17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 MAP2K1Q02750 393 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 GRM1Q13255 1194 aa17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
POLR2J3-216ENST00000511773 FZD9O00144 591 aa17.77■□□□□ 0.44
POLR2J3-216ENST00000511773 GPC2Q8N158 579 aa17.77■□□□□ 0.44
POLR2J3-216ENST00000511773 GJA3Q9Y6H8 435 aa17.77■□□□□ 0.44
POLR2J3-216ENST00000511773 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
POLR2J3-216ENST00000511773 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
POLR2J3-216ENST00000511773 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
POLR2J3-216ENST00000511773 GTF2E1P29083 439 aaPredicted RBP17.75■□□□□ 0.43
POLR2J3-216ENST00000511773 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
POLR2J3-216ENST00000511773 JDP2Q8WYK2 163 aa17.75■□□□□ 0.43
POLR2J3-216ENST00000511773 LTBP1Q14766 1721 aa17.75■□□□□ 0.43
POLR2J3-216ENST00000511773 COL4A5P29400 1685 aa17.74■□□□□ 0.43
POLR2J3-216ENST00000511773 THSD7BQ9C0I4 1608 aa17.74■□□□□ 0.43
POLR2J3-216ENST00000511773 CCDC85CA6NKD9 419 aa17.74■□□□□ 0.43
POLR2J3-216ENST00000511773 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
POLR2J3-216ENST00000511773 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
POLR2J3-216ENST00000511773 NBPF26B4DH59 902 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 PER1O15534 1290 aaPredicted RBP17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 SNRPA1P09661 255 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 MCM10Q7L590 875 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 NBPF15Q8N660 670 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 ABCC12Q96J65 1359 aa17.73■□□□□ 0.43
POLR2J3-216ENST00000511773 HLFQ16534 295 aa17.72■□□□□ 0.43
POLR2J3-216ENST00000511773 CYP4F22Q6NT55 531 aa17.72■□□□□ 0.43
POLR2J3-216ENST00000511773 PSMD1Q99460 953 aa17.72■□□□□ 0.43
POLR2J3-216ENST00000511773 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
POLR2J3-216ENST00000511773 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
POLR2J3-216ENST00000511773 TRAF5O00463 557 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms