RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 CCDC27Q2M243 656 aa6.7□□□□□ -1.34
SPARCL1-206ENST00000509407 FAM182BQ5T319 152 aa6.7□□□□□ -1.34
SPARCL1-206ENST00000509407 ALG2Q9H553 416 aa6.7□□□□□ -1.34
SPARCL1-206ENST00000509407 IQSEC3Q9UPP2 1182 aaPredicted RBP6.7□□□□□ -1.34
SPARCL1-206ENST00000509407 DCDC2BA2VCK2 349 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 NEURL1BA8MQ27 555 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 GNB5O14775 395 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 KHNYNO15037 678 aaKnown RBP6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 MAPTP10636 758 aaKnown RBP6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 ADH6P28332 368 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 TNP2Q05952 138 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 NCOA4Q13772 614 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 BICDL1Q6ZP65 573 aa6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 AVENQ9NQS1 362 aaPredicted RBP6.69□□□□□ -1.34
SPARCL1-206ENST00000509407 FAM157BP0CG42 384 aa6.68□□□□□ -1.34
SPARCL1-206ENST00000509407 NCLP19338 710 aaKnown RBP6.68□□□□□ -1.34
SPARCL1-206ENST00000509407 TRIM50Q86XT4 487 aa6.68□□□□□ -1.34
SPARCL1-206ENST00000509407 ZNF295-AS1Q8N0V1 137 aa6.68□□□□□ -1.34
SPARCL1-206ENST00000509407 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
SPARCL1-206ENST00000509407 ZIC5Q96T25 663 aa6.68□□□□□ -1.34
SPARCL1-206ENST00000509407 USP17L5A8MUK1 530 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 PROCP04070 461 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 ITGB2P05107 769 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 CD33P20138 364 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 GRIN2CQ14957 1233 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 SAMD5Q5TGI4 173 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 ANKRD13AQ8IZ07 590 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 ZNF358Q9NW07 568 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 NOP53Q9NZM5 478 aaKnown RBP6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 SCHIP1Q9P0W5 487 aaPredicted RBP6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 USP3Q9Y6I4 520 aa6.67□□□□□ -1.34
SPARCL1-206ENST00000509407 KRBA1A5PL33 1030 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 ATP1A2P50993 1020 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 LAMC2Q13753 1193 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 LINC00114Q6XXX2 140 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 CLUAP1Q96AJ1 413 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 POM121Q96HA1 1249 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 NEUROD4Q9HD90 331 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
SPARCL1-206ENST00000509407 ADAM23O75077 832 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 COL8A1P27658 744 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 DGKGP49619 791 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 TEAD4Q15561 434 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 ZNF468Q5VIY5 522 aaPredicted RBP6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 CHSY3Q70JA7 882 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 DEPDC4Q8N2C3 294 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 ZNF526Q8TF50 670 aaPredicted RBP6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 L3MBTL2Q969R5 705 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 ZNF232Q9UNY5 417 aa6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 GPC6Q9Y625 555 aaPredicted RBP6.65□□□□□ -1.34
SPARCL1-206ENST00000509407 HOXB4P17483 251 aaPredicted RBP6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 PTMSP20962 102 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 NOS2P35228 1153 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 TXLNAP40222 546 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 PLEKHM2Q8IWE5 1019 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 ZDHHC1Q8WTX9 485 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 NAP1L5Q96NT1 182 aaPredicted RBP6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 CHMP3Q9Y3E7 222 aa6.64□□□□□ -1.35
SPARCL1-206ENST00000509407 SERTM1A2A2V5 107 aa6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 EML1O00423 815 aa6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 EFSO43281 561 aa6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 TMED8Q6PL24 325 aaPredicted RBP6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 FCHSD1Q86WN1 690 aa6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 SUV39H2Q9H5I1 410 aa6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 PRDM16Q9HAZ2 1276 aa6.63□□□□□ -1.35
SPARCL1-206ENST00000509407 USP17L3A6NCW0 530 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 USP17L4A6NCW7 530 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 ALAS2P22557 587 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 EPHA4P54764 986 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 PCBP4P57723 403 aaKnown RBP6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 USP17L2Q6R6M4 530 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 LRRC69Q6ZNQ3 347 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 TEX2Q8IWB9 1127 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 TNS4Q8IZW8 715 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 TPCN2Q8NHX9 752 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 SPATA32Q96LK8 384 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 KLF15Q9UIH9 416 aa6.62□□□□□ -1.35
SPARCL1-206ENST00000509407 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 K7ELQ4 463 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 ZEB1P37275 1124 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 BAG6P46379 1132 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 PSMA6P60900 246 aaKnown RBP6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 KCNA1Q09470 495 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 CCDC102BQ68D86 513 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 RHPN1Q8TCX5 695 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 STRN4Q9NRL3 753 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 HCN2Q9UL51 889 aa6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 ZNF777Q9ULD5 760 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 RBM19Q9Y4C8 960 aaKnown RBP6.61□□□□□ -1.35
SPARCL1-206ENST00000509407 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-206ENST00000509407 A0A0U1RQG5 324 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-206ENST00000509407 PALM3A6NDB9 673 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms