RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 GCC1Q96CN9 775 aa15.77■□□□□ 0.11
LYSMD3-204ENST00000509384 PDZRN3Q9UPQ7 1066 aa15.77■□□□□ 0.11
LYSMD3-204ENST00000509384 ZNF330Q9Y3S2 320 aaPredicted RBP15.77■□□□□ 0.11
LYSMD3-204ENST00000509384 IBTKQ9P2D0 1353 aaPredicted RBP15.76■□□□□ 0.11
LYSMD3-204ENST00000509384 HMMRO75330 724 aa15.76■□□□□ 0.11
LYSMD3-204ENST00000509384 C9orf78Q9NZ63 289 aaPredicted RBP15.76■□□□□ 0.11
LYSMD3-204ENST00000509384 LRRFIP2Q9Y608 721 aaKnown RBP15.76■□□□□ 0.11
LYSMD3-204ENST00000509384 TJP1Q07157 1748 aa15.76■□□□□ 0.11
LYSMD3-204ENST00000509384 IGKV5-2P06315 115 aa15.75■□□□□ 0.11
LYSMD3-204ENST00000509384 RBM6P78332 1123 aaKnown RBP15.75■□□□□ 0.11
LYSMD3-204ENST00000509384 KIF6Q6ZMV9 814 aa15.75■□□□□ 0.11
LYSMD3-204ENST00000509384 HDAC5Q9UQL6 1122 aa15.75■□□□□ 0.11
LYSMD3-204ENST00000509384 ZBTB1Q9Y2K1 713 aa15.75■□□□□ 0.11
LYSMD3-204ENST00000509384 NHSQ6T4R5 1651 aa15.74■□□□□ 0.11
LYSMD3-204ENST00000509384 NEURL1BA8MQ27 555 aa15.74■□□□□ 0.11
LYSMD3-204ENST00000509384 NBPF7P0C2Y1 421 aaPredicted RBP15.74■□□□□ 0.11
LYSMD3-204ENST00000509384 RGS3P49796 1198 aa15.74■□□□□ 0.11
LYSMD3-204ENST00000509384 ZBTB3Q9H5J0 574 aa15.74■□□□□ 0.11
LYSMD3-204ENST00000509384 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
LYSMD3-204ENST00000509384 GRM8O00222 908 aa15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 ITPK1Q13572 414 aa15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 KRT27Q7Z3Y8 459 aa15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 CCDC87Q9NVE4 849 aa15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 CICQ96RK0 1608 aaPredicted RBP15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 CRKLP46109 303 aaKnown RBP15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 GCKRQ14397 625 aa15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 PTF1AQ7RTS3 328 aa15.73■□□□□ 0.11
LYSMD3-204ENST00000509384 UTYO14607 1347 aa15.72■□□□□ 0.11
LYSMD3-204ENST00000509384 IL6STP40189 918 aaPredicted RBP15.72■□□□□ 0.11
LYSMD3-204ENST00000509384 ATP8B2P98198 1209 aa15.72■□□□□ 0.11
LYSMD3-204ENST00000509384 NUCB1Q02818 461 aa15.72■□□□□ 0.11
LYSMD3-204ENST00000509384 DCTPP1Q9H773 170 aa15.72■□□□□ 0.11
LYSMD3-204ENST00000509384 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
LYSMD3-204ENST00000509384 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.11
LYSMD3-204ENST00000509384 ARXQ96QS3 562 aa15.71■□□□□ 0.11
LYSMD3-204ENST00000509384 MAP3K15Q6ZN16 1313 aa15.7■□□□□ 0.1
LYSMD3-204ENST00000509384 ANKRD45Q5TZF3 282 aa15.7■□□□□ 0.1
LYSMD3-204ENST00000509384 INTS5Q6P9B9 1019 aaKnown RBP15.7■□□□□ 0.1
LYSMD3-204ENST00000509384 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
LYSMD3-204ENST00000509384 CHD1LQ86WJ1 897 aa15.7■□□□□ 0.1
LYSMD3-204ENST00000509384 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 SUCLG2Q96I99 432 aa15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 BCL11BQ9C0K0 894 aaPredicted RBP15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 CWC25Q9NXE8 425 aaPredicted RBP15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 ZBTB47Q9UFB7 747 aaPredicted RBP15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 NUP188Q5SRE5 1749 aa15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
LYSMD3-204ENST00000509384 RXRBP28702 533 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 PPP1R42Q7Z4L9 355 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 LNPKQ9C0E8 428 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 BTAF1O14981 1849 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 A0A087WZG4 1122 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 SRGAP3O43295 1099 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 TCIRG1Q13488 830 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 CCDC191Q8NCU4 936 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 SSH3Q8TE77 659 aa15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
LYSMD3-204ENST00000509384 RREB1Q92766 1687 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 PDE4AP27815 886 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 MTX1Q13505 466 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 POLA2Q14181 598 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 HSP90AB3PQ58FF7 597 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 UBE3BQ7Z3V4 1068 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 ISCA1Q9BUE6 129 aa15.67■□□□□ 0.1
LYSMD3-204ENST00000509384 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
LYSMD3-204ENST00000509384 ERVV-1B6SEH8 477 aa15.66■□□□□ 0.1
LYSMD3-204ENST00000509384 BICC1Q9H694 974 aaKnown RBP15.66■□□□□ 0.1
LYSMD3-204ENST00000509384 TBC1D2BQ9UPU7 963 aa15.66■□□□□ 0.1
LYSMD3-204ENST00000509384 COL15A1P39059 1388 aa15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 APBB1O00213 710 aa15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 KCNQ4P56696 695 aa15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 TRIM28Q13263 835 aaKnown RBP15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 RGS17Q9UGC6 210 aaPredicted RBP15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 EXOC6BQ9Y2D4 811 aa15.65■□□□□ 0.1
LYSMD3-204ENST00000509384 H7C1W4 665 aa15.64■□□□□ 0.09
LYSMD3-204ENST00000509384 CASP7P55210 303 aa15.64■□□□□ 0.09
LYSMD3-204ENST00000509384 HLFQ16534 295 aa15.64■□□□□ 0.09
LYSMD3-204ENST00000509384 COL5A3P25940 1745 aaPredicted RBP15.64■□□□□ 0.09
LYSMD3-204ENST00000509384 TRIM37O94972 964 aa15.63■□□□□ 0.09
LYSMD3-204ENST00000509384 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
LYSMD3-204ENST00000509384 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
LYSMD3-204ENST00000509384 BRWD3Q6RI45 1802 aa15.63■□□□□ 0.09
LYSMD3-204ENST00000509384 SBF2Q86WG5 1849 aa15.63■□□□□ 0.09
LYSMD3-204ENST00000509384 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
LYSMD3-204ENST00000509384 AFDNP55196 1824 aaKnown RBP15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 SURF6O75683 361 aaKnown RBP15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 CAMTA2O94983 1202 aa15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 GPTP24298 496 aa15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 HSP90AB4PQ58FF6 505 aa15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 LRRCC1Q9C099 1032 aa15.62■□□□□ 0.09
LYSMD3-204ENST00000509384 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
LYSMD3-204ENST00000509384 PCCAP05165 728 aaPredicted RBP15.61■□□□□ 0.09
LYSMD3-204ENST00000509384 FAM161AQ3B820 660 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms