RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 ATRNO75882 1429 aa16.46■□□□□ 0.23
SPSB4-204ENST00000508828 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.23
SPSB4-204ENST00000508828 A1BGP04217 495 aa16.46■□□□□ 0.23
SPSB4-204ENST00000508828 MYD88Q99836 296 aa16.46■□□□□ 0.23
SPSB4-204ENST00000508828 AFDNP55196 1824 aaKnown RBP16.46■□□□□ 0.23
SPSB4-204ENST00000508828 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
SPSB4-204ENST00000508828 NEURL1BA8MQ27 555 aa16.45■□□□□ 0.22
SPSB4-204ENST00000508828 GRM8O00222 908 aa16.45■□□□□ 0.22
SPSB4-204ENST00000508828 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
SPSB4-204ENST00000508828 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
SPSB4-204ENST00000508828 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
SPSB4-204ENST00000508828 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
SPSB4-204ENST00000508828 UTYO14607 1347 aa16.45■□□□□ 0.22
SPSB4-204ENST00000508828 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-204ENST00000508828 CWF19L2Q2TBE0 894 aaKnown RBP16.44■□□□□ 0.22
SPSB4-204ENST00000508828 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-204ENST00000508828 IGKV5-2P06315 115 aa16.43■□□□□ 0.22
SPSB4-204ENST00000508828 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
SPSB4-204ENST00000508828 GCKRQ14397 625 aa16.42■□□□□ 0.22
SPSB4-204ENST00000508828 C8orf34Q49A92 452 aa16.42■□□□□ 0.22
SPSB4-204ENST00000508828 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
SPSB4-204ENST00000508828 TTLL7Q6ZT98 887 aa16.42■□□□□ 0.22
SPSB4-204ENST00000508828 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
SPSB4-204ENST00000508828 QTRT2Q9H974 415 aaKnown RBP16.42■□□□□ 0.22
SPSB4-204ENST00000508828 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
SPSB4-204ENST00000508828 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
SPSB4-204ENST00000508828 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
SPSB4-204ENST00000508828 MTX1Q13505 466 aa16.41■□□□□ 0.22
SPSB4-204ENST00000508828 POLA2Q14181 598 aa16.41■□□□□ 0.22
SPSB4-204ENST00000508828 PPP1R42Q7Z4L9 355 aa16.41■□□□□ 0.22
SPSB4-204ENST00000508828 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
SPSB4-204ENST00000508828 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
SPSB4-204ENST00000508828 RREB1Q92766 1687 aa16.4■□□□□ 0.22
SPSB4-204ENST00000508828 COL15A1P39059 1388 aa16.39■□□□□ 0.21
SPSB4-204ENST00000508828 SRGAP3O43295 1099 aa16.39■□□□□ 0.21
SPSB4-204ENST00000508828 RAB11FIP3O75154 756 aa16.39■□□□□ 0.21
SPSB4-204ENST00000508828 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
SPSB4-204ENST00000508828 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
SPSB4-204ENST00000508828 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
SPSB4-204ENST00000508828 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
SPSB4-204ENST00000508828 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
SPSB4-204ENST00000508828 IL6STP40189 918 aaPredicted RBP16.38■□□□□ 0.21
SPSB4-204ENST00000508828 SIK1P57059 783 aa16.38■□□□□ 0.21
SPSB4-204ENST00000508828 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
SPSB4-204ENST00000508828 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
SPSB4-204ENST00000508828 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
SPSB4-204ENST00000508828 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
SPSB4-204ENST00000508828 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 APBB1O00213 710 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPSB4-204ENST00000508828 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 MAP3K15Q6ZN16 1313 aa16.37■□□□□ 0.21
SPSB4-204ENST00000508828 EP400Q96L91 3159 aa16.36■□□□□ 0.21
SPSB4-204ENST00000508828 A0A087WZG4 1122 aa16.36■□□□□ 0.21
SPSB4-204ENST00000508828 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
SPSB4-204ENST00000508828 SURF6O75683 361 aaKnown RBP16.36■□□□□ 0.21
SPSB4-204ENST00000508828 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
SPSB4-204ENST00000508828 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
SPSB4-204ENST00000508828 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
SPSB4-204ENST00000508828 BTAF1O14981 1849 aa16.35■□□□□ 0.21
SPSB4-204ENST00000508828 KCNQ2O43526 872 aa16.35■□□□□ 0.21
SPSB4-204ENST00000508828 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
SPSB4-204ENST00000508828 ANP32AP39687 249 aaKnown RBP16.35■□□□□ 0.21
SPSB4-204ENST00000508828 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
SPSB4-204ENST00000508828 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
SPSB4-204ENST00000508828 BICC1Q9H694 974 aaKnown RBP16.35■□□□□ 0.21
SPSB4-204ENST00000508828 COL5A3P25940 1745 aaPredicted RBP16.35■□□□□ 0.21
SPSB4-204ENST00000508828 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
SPSB4-204ENST00000508828 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
SPSB4-204ENST00000508828 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
SPSB4-204ENST00000508828 PLEKHM2Q8IWE5 1019 aa16.34■□□□□ 0.21
SPSB4-204ENST00000508828 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
SPSB4-204ENST00000508828 KIF1BPQ96EK5 621 aa16.34■□□□□ 0.21
SPSB4-204ENST00000508828 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
SPSB4-204ENST00000508828 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
SPSB4-204ENST00000508828 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.2
SPSB4-204ENST00000508828 KAZALD1Q96I82 304 aa16.33■□□□□ 0.2
SPSB4-204ENST00000508828 ARXQ96QS3 562 aa16.33■□□□□ 0.2
SPSB4-204ENST00000508828 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
SPSB4-204ENST00000508828 H7C1W4 665 aa16.32■□□□□ 0.2
SPSB4-204ENST00000508828 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
SPSB4-204ENST00000508828 CASP7P55210 303 aa16.32■□□□□ 0.2
SPSB4-204ENST00000508828 ITPK1Q13572 414 aa16.32■□□□□ 0.2
SPSB4-204ENST00000508828 SBF2Q86WG5 1849 aa16.32■□□□□ 0.2
SPSB4-204ENST00000508828 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
SPSB4-204ENST00000508828 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
SPSB4-204ENST00000508828 RABL6Q3YEC7 729 aaPredicted RBP16.31■□□□□ 0.2
SPSB4-204ENST00000508828 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
SPSB4-204ENST00000508828 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
SPSB4-204ENST00000508828 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
SPSB4-204ENST00000508828 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
SPSB4-204ENST00000508828 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
SPSB4-204ENST00000508828 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
SPSB4-204ENST00000508828 AOX1Q06278 1338 aa16.3■□□□□ 0.2
SPSB4-204ENST00000508828 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPSB4-204ENST00000508828 BCL11AQ9H165 835 aa16.3■□□□□ 0.2
SPSB4-204ENST00000508828 NUP98P52948 1817 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms