RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 CETN2P41208 172 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 TAF4BQ92750 862 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 LDHCP07864 332 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 TRAPPC3LQ5T215 181 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 USP21Q9UK80 565 aa10.44□□□□□ -0.74
KLHL3-209ENST00000508657 CD109Q6YHK3 1445 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 GOLGA8AA7E2F4 631 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 GOLGA8BA8MQT2 603 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 SH3BP5O60239 455 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 UBE3BQ7Z3V4 1068 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 PDZRN3Q9UPQ7 1066 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 IVNS1ABPQ9Y6Y0 642 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 LARGE2Q8N3Y3 721 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 ARGLU1Q9NWB6 273 aaPredicted RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 ABT1Q9ULW3 272 aaKnown RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 UIMC1Q96RL1 719 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 CWC25Q9NXE8 425 aaPredicted RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 PRPF4BQ13523 1007 aaKnown RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 CCDC117Q8IWD4 279 aaPredicted RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 WASF1Q92558 559 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 CDCA7Q9BWT1 371 aaPredicted RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 BACH1O14867 736 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 CYP7A1P22680 504 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 CALRP27797 417 aaKnown RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 NOP9Q86U38 636 aaKnown RBP10.43□□□□□ -0.74
KLHL3-209ENST00000508657 ANO3Q9BYT9 981 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 TMOD4Q9NZQ9 345 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
KLHL3-209ENST00000508657 SSRP1Q08945 709 aaKnown RBP10.42□□□□□ -0.74
KLHL3-209ENST00000508657 HEATR3Q7Z4Q2 680 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
KLHL3-209ENST00000508657 SMC1AQ14683 1233 aaKnown RBP10.42□□□□□ -0.74
KLHL3-209ENST00000508657 RNF169Q8NCN4 708 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
KLHL3-209ENST00000508657 PDE4BQ07343 736 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
KLHL3-209ENST00000508657 ISM2Q6H9L7 571 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 SKIV2LQ15477 1246 aaKnown RBP10.42□□□□□ -0.74
KLHL3-209ENST00000508657 CCDC174Q6PII3 467 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 ZNF804AQ7Z570 1209 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 SPATA32Q96LK8 384 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 CAPN15O75808 1086 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 GTF3C6Q969F1 213 aa10.42□□□□□ -0.74
KLHL3-209ENST00000508657 PDCP20941 246 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 KIF22Q14807 665 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 ANKRD1Q15327 319 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 SMCR8Q8TEV9 937 aaPredicted RBP10.41□□□□□ -0.74
KLHL3-209ENST00000508657 CPLX3Q8WVH0 158 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 AMOTQ4VCS5 1084 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 DZIP3Q86Y13 1208 aaKnown RBP10.41□□□□□ -0.74
KLHL3-209ENST00000508657 CCDC83Q8IWF9 413 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 CRNKL1Q9BZJ0 848 aaKnown RBP10.41□□□□□ -0.74
KLHL3-209ENST00000508657 BCCIPQ9P287 314 aaKnown RBP eCLIP10.41□□□□□ -0.74
KLHL3-209ENST00000508657 TMEM67Q5HYA8 995 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 HOOK3Q86VS8 718 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
KLHL3-209ENST00000508657 NACA2Q9H009 215 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 CEP131Q9UPN4 1083 aa10.41□□□□□ -0.74
KLHL3-209ENST00000508657 ZBTB24O43167 697 aaPredicted RBP10.4□□□□□ -0.74
KLHL3-209ENST00000508657 KIF5BP33176 963 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 TTC30AQ86WT1 665 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
KLHL3-209ENST00000508657 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
KLHL3-209ENST00000508657 GSTO1P78417 241 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 MICU3Q86XE3 530 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 PAGR1Q9BTK6 254 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 SBNO2Q9Y2G9 1366 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 SNAPC4Q5SXM2 1469 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 GOLGA6L10A0A0M3HER8 536 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 TCP10Q12799 353 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 CCDC40Q4G0X9 1142 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 ZNF397Q8NF99 534 aaPredicted RBP10.4□□□□□ -0.74
KLHL3-209ENST00000508657 TNNI2P48788 182 aa10.4□□□□□ -0.74
KLHL3-209ENST00000508657 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
KLHL3-209ENST00000508657 RAB34Q9BZG1 259 aa10.4□□□□□ -0.75
KLHL3-209ENST00000508657 KIF7Q2M1P5 1343 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 H0YIN7 160 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 MIGA1Q8NAN2 632 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 TMEM110-MUSTN1A8MSY1 372 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 DYDC1Q8WWB3 177 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 CALML4Q96GE6 196 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 RBM17Q96I25 401 aaKnown RBP10.39□□□□□ -0.75
KLHL3-209ENST00000508657 TSPY26PQ9H489 355 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 PRKAG2Q9UGJ0 569 aa10.39□□□□□ -0.75
KLHL3-209ENST00000508657 SLC4A4Q9Y6R1 1079 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms