RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 VEGFAP15692 232 aaPredicted RBP21.6■■□□□ 1.05
DDR1-263ENST00000508317 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
DDR1-263ENST00000508317 SMC1BQ8NDV3 1235 aa21.6■■□□□ 1.05
DDR1-263ENST00000508317 MASTLQ96GX5 879 aa21.6■■□□□ 1.05
DDR1-263ENST00000508317 BRCA1P38398 1863 aaKnown RBP21.6■■□□□ 1.05
DDR1-263ENST00000508317 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
DDR1-263ENST00000508317 NIP7Q9Y221 180 aaKnown RBP eCLIP21.59■■□□□ 1.05
DDR1-263ENST00000508317 GLTPD2A6NH11 291 aa21.58■■□□□ 1.05
DDR1-263ENST00000508317 KIF6Q6ZMV9 814 aa21.58■■□□□ 1.05
DDR1-263ENST00000508317 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.05
DDR1-263ENST00000508317 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
DDR1-263ENST00000508317 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
DDR1-263ENST00000508317 ERFEQ4G0M1 354 aa21.57■■□□□ 1.04
DDR1-263ENST00000508317 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
DDR1-263ENST00000508317 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
DDR1-263ENST00000508317 RALBP1Q15311 655 aa21.56■■□□□ 1.04
DDR1-263ENST00000508317 NYXQ9GZU5 481 aa21.56■■□□□ 1.04
DDR1-263ENST00000508317 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
DDR1-263ENST00000508317 HSPA1AP0DMV8 641 aaKnown RBP21.55■■□□□ 1.04
DDR1-263ENST00000508317 HSPA1BP0DMV9 641 aaKnown RBP21.55■■□□□ 1.04
DDR1-263ENST00000508317 NPR1P16066 1061 aa21.55■■□□□ 1.04
DDR1-263ENST00000508317 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
DDR1-263ENST00000508317 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
DDR1-263ENST00000508317 MIS18AQ9NYP9 233 aa21.55■■□□□ 1.04
DDR1-263ENST00000508317 SRGNP10124 158 aa21.54■■□□□ 1.04
DDR1-263ENST00000508317 PRPF40BQ6NWY9 871 aaKnown RBP21.54■■□□□ 1.04
DDR1-263ENST00000508317 PRAMEF22A3QJZ6 481 aa21.53■■□□□ 1.04
DDR1-263ENST00000508317 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
DDR1-263ENST00000508317 ALDH1B1P30837 517 aa21.53■■□□□ 1.04
DDR1-263ENST00000508317 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
DDR1-263ENST00000508317 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
DDR1-263ENST00000508317 NFKBIEO00221 500 aa21.52■■□□□ 1.04
DDR1-263ENST00000508317 CCDC93Q567U6 631 aa21.52■■□□□ 1.04
DDR1-263ENST00000508317 LTBP3Q9NS15 1303 aa21.51■■□□□ 1.03
DDR1-263ENST00000508317 ERVV-1B6SEH8 477 aa21.5■■□□□ 1.03
DDR1-263ENST00000508317 RTKN2Q8IZC4 609 aa21.5■■□□□ 1.03
DDR1-263ENST00000508317 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
DDR1-263ENST00000508317 NRXN2Q9P2S2 1712 aa21.49■■□□□ 1.03
DDR1-263ENST00000508317 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
DDR1-263ENST00000508317 MYL6BP14649 208 aa21.49■■□□□ 1.03
DDR1-263ENST00000508317 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
DDR1-263ENST00000508317 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
DDR1-263ENST00000508317 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
DDR1-263ENST00000508317 RIPK4P57078 832 aa21.48■■□□□ 1.03
DDR1-263ENST00000508317 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDR1-263ENST00000508317 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
DDR1-263ENST00000508317 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
DDR1-263ENST00000508317 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
DDR1-263ENST00000508317 IQCA1LA6NCM1 817 aa21.47■■□□□ 1.03
DDR1-263ENST00000508317 EIF4A1P60842 406 aaKnown RBP21.47■■□□□ 1.03
DDR1-263ENST00000508317 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
DDR1-263ENST00000508317 AFDNP55196 1824 aaKnown RBP21.46■■□□□ 1.03
DDR1-263ENST00000508317 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
DDR1-263ENST00000508317 ERBB4Q15303 1308 aa21.46■■□□□ 1.03
DDR1-263ENST00000508317 MAP3K15Q6ZN16 1313 aa21.46■■□□□ 1.03
DDR1-263ENST00000508317 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
DDR1-263ENST00000508317 PPP1R42Q7Z4L9 355 aa21.45■■□□□ 1.02
DDR1-263ENST00000508317 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
DDR1-263ENST00000508317 SLC34A2O95436 690 aa21.44■■□□□ 1.02
DDR1-263ENST00000508317 FKBP4Q02790 459 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDR1-263ENST00000508317 HLFQ16534 295 aa21.44■■□□□ 1.02
DDR1-263ENST00000508317 GRIPAP1Q4V328 841 aa21.44■■□□□ 1.02
DDR1-263ENST00000508317 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
DDR1-263ENST00000508317 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
DDR1-263ENST00000508317 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
DDR1-263ENST00000508317 JDP2Q8WYK2 163 aa21.43■■□□□ 1.02
DDR1-263ENST00000508317 ZBTB3Q9H5J0 574 aa21.43■■□□□ 1.02
DDR1-263ENST00000508317 KLRG2A4D1S0 409 aaPredicted RBP21.42■■□□□ 1.02
DDR1-263ENST00000508317 PARP10Q53GL7 1025 aa21.42■■□□□ 1.02
DDR1-263ENST00000508317 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
DDR1-263ENST00000508317 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
DDR1-263ENST00000508317 SBF1O95248 1867 aa21.41■■□□□ 1.02
DDR1-263ENST00000508317 GPTP24298 496 aa21.41■■□□□ 1.02
DDR1-263ENST00000508317 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
DDR1-263ENST00000508317 HSP90AB3PQ58FF7 597 aa21.4■■□□□ 1.02
DDR1-263ENST00000508317 DLEC1Q9Y238 1755 aa21.39■■□□□ 1.01
DDR1-263ENST00000508317 DDNO94850 711 aaPredicted RBP21.39■■□□□ 1.01
DDR1-263ENST00000508317 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
DDR1-263ENST00000508317 NUTM1Q86Y26 1132 aa21.39■■□□□ 1.01
DDR1-263ENST00000508317 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.01
DDR1-263ENST00000508317 POTECB2RU33 542 aa21.38■■□□□ 1.01
DDR1-263ENST00000508317 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
DDR1-263ENST00000508317 GIGYF2Q6Y7W6 1299 aaKnown RBP21.38■■□□□ 1.01
DDR1-263ENST00000508317 TTLL7Q6ZT98 887 aa21.38■■□□□ 1.01
DDR1-263ENST00000508317 NLRP3Q96P20 1036 aa21.38■■□□□ 1.01
DDR1-263ENST00000508317 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
DDR1-263ENST00000508317 EIF6P56537 245 aaKnown RBP21.37■■□□□ 1.01
DDR1-263ENST00000508317 SYNE4Q8N205 404 aa21.37■■□□□ 1.01
DDR1-263ENST00000508317 C7orf43Q8WVR3 580 aa21.37■■□□□ 1.01
DDR1-263ENST00000508317 IBTKQ9P2D0 1353 aaPredicted RBP21.36■■□□□ 1.01
DDR1-263ENST00000508317 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
DDR1-263ENST00000508317 RUNDC1Q96C34 613 aa21.36■■□□□ 1.01
DDR1-263ENST00000508317 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
DDR1-263ENST00000508317 CLEC11AQ9Y240 323 aa21.36■■□□□ 1.01
DDR1-263ENST00000508317 EAPPQ56P03 285 aaPredicted RBP21.35■■□□□ 1.01
DDR1-263ENST00000508317 PNMA8AQ86V59 439 aaPredicted RBP21.35■■□□□ 1.01
DDR1-263ENST00000508317 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
DDR1-263ENST00000508317 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
DDR1-263ENST00000508317 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
DDR1-263ENST00000508317 CRY2Q49AN0 593 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms