RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 ATP6V1AP38606 617 aa20.28■□□□□ 0.84
SPSB4-203ENST00000508126 ZNF330Q9Y3S2 320 aaPredicted RBP20.28■□□□□ 0.84
SPSB4-203ENST00000508126 NEURL1BA8MQ27 555 aa20.27■□□□□ 0.84
SPSB4-203ENST00000508126 GRM8O00222 908 aa20.27■□□□□ 0.84
SPSB4-203ENST00000508126 IGKV5-2P06315 115 aa20.27■□□□□ 0.84
SPSB4-203ENST00000508126 NBPF7P0C2Y1 421 aaPredicted RBP20.27■□□□□ 0.84
SPSB4-203ENST00000508126 TTLL7Q6ZT98 887 aa20.27■□□□□ 0.84
SPSB4-203ENST00000508126 NUCB1Q02818 461 aa20.26■□□□□ 0.83
SPSB4-203ENST00000508126 KIF6Q6ZMV9 814 aa20.26■□□□□ 0.83
SPSB4-203ENST00000508126 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
SPSB4-203ENST00000508126 NUP188Q5SRE5 1749 aa20.26■□□□□ 0.83
SPSB4-203ENST00000508126 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
SPSB4-203ENST00000508126 UTYO14607 1347 aa20.25■□□□□ 0.83
SPSB4-203ENST00000508126 ATP8B2P98198 1209 aa20.25■□□□□ 0.83
SPSB4-203ENST00000508126 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
SPSB4-203ENST00000508126 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
SPSB4-203ENST00000508126 GCKRQ14397 625 aa20.24■□□□□ 0.83
SPSB4-203ENST00000508126 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
SPSB4-203ENST00000508126 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
SPSB4-203ENST00000508126 ZNF831Q5JPB2 1677 aa20.24■□□□□ 0.83
SPSB4-203ENST00000508126 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
SPSB4-203ENST00000508126 CHD1LQ86WJ1 897 aa20.23■□□□□ 0.83
SPSB4-203ENST00000508126 BTAF1O14981 1849 aa20.23■□□□□ 0.83
SPSB4-203ENST00000508126 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
SPSB4-203ENST00000508126 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
SPSB4-203ENST00000508126 FBXO41Q8TF61 875 aa20.23■□□□□ 0.83
SPSB4-203ENST00000508126 CCDC87Q9NVE4 849 aa20.23■□□□□ 0.83
SPSB4-203ENST00000508126 ZBTB47Q9UFB7 747 aaPredicted RBP20.23■□□□□ 0.83
SPSB4-203ENST00000508126 ITPK1Q13572 414 aa20.22■□□□□ 0.83
SPSB4-203ENST00000508126 AFDNP55196 1824 aaKnown RBP20.22■□□□□ 0.83
SPSB4-203ENST00000508126 PNMA6EA0A0J9YXQ4 647 aa20.21■□□□□ 0.83
SPSB4-203ENST00000508126 CRKLP46109 303 aaKnown RBP20.21■□□□□ 0.83
SPSB4-203ENST00000508126 LNPKQ9C0E8 428 aa20.21■□□□□ 0.83
SPSB4-203ENST00000508126 MAP3K15Q6ZN16 1313 aa20.21■□□□□ 0.83
SPSB4-203ENST00000508126 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
SPSB4-203ENST00000508126 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
SPSB4-203ENST00000508126 PTF1AQ7RTS3 328 aa20.2■□□□□ 0.82
SPSB4-203ENST00000508126 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
SPSB4-203ENST00000508126 ARXQ96QS3 562 aa20.2■□□□□ 0.82
SPSB4-203ENST00000508126 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
SPSB4-203ENST00000508126 RREB1Q92766 1687 aa20.2■□□□□ 0.82
SPSB4-203ENST00000508126 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
SPSB4-203ENST00000508126 MTX1Q13505 466 aa20.19■□□□□ 0.82
SPSB4-203ENST00000508126 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
SPSB4-203ENST00000508126 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
SPSB4-203ENST00000508126 SSH3Q8TE77 659 aa20.19■□□□□ 0.82
SPSB4-203ENST00000508126 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
SPSB4-203ENST00000508126 SRGAP3O43295 1099 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 POLA2Q14181 598 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 CCDC191Q8NCU4 936 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 A0A087WZG4 1122 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 PDE4AP27815 886 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
SPSB4-203ENST00000508126 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
SPSB4-203ENST00000508126 GIGYF2Q6Y7W6 1299 aaKnown RBP20.17■□□□□ 0.82
SPSB4-203ENST00000508126 DZIP3Q86Y13 1208 aaKnown RBP20.17■□□□□ 0.82
SPSB4-203ENST00000508126 BCL11BQ9C0K0 894 aaPredicted RBP20.17■□□□□ 0.82
SPSB4-203ENST00000508126 COL15A1P39059 1388 aa20.17■□□□□ 0.82
SPSB4-203ENST00000508126 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
SPSB4-203ENST00000508126 ERVV-1B6SEH8 477 aa20.16■□□□□ 0.82
SPSB4-203ENST00000508126 UBE3BQ7Z3V4 1068 aa20.16■□□□□ 0.82
SPSB4-203ENST00000508126 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
SPSB4-203ENST00000508126 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
SPSB4-203ENST00000508126 TRIM28Q13263 835 aaKnown RBP20.15■□□□□ 0.82
SPSB4-203ENST00000508126 LINC00116Q8NCU8 138 aa20.15■□□□□ 0.82
SPSB4-203ENST00000508126 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
SPSB4-203ENST00000508126 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
SPSB4-203ENST00000508126 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
SPSB4-203ENST00000508126 APBB1O00213 710 aa20.14■□□□□ 0.81
SPSB4-203ENST00000508126 KAZALD1Q96I82 304 aa20.14■□□□□ 0.81
SPSB4-203ENST00000508126 RXRBP28702 533 aa20.13■□□□□ 0.81
SPSB4-203ENST00000508126 FAM161AQ3B820 660 aa20.13■□□□□ 0.81
SPSB4-203ENST00000508126 MYH14Q7Z406 1995 aaKnown RBP20.13■□□□□ 0.81
SPSB4-203ENST00000508126 H7C1W4 665 aa20.13■□□□□ 0.81
SPSB4-203ENST00000508126 HSP90AB4PQ58FF6 505 aa20.13■□□□□ 0.81
SPSB4-203ENST00000508126 LRRCC1Q9C099 1032 aa20.13■□□□□ 0.81
SPSB4-203ENST00000508126 TBC1D2BQ9UPU7 963 aa20.13■□□□□ 0.81
SPSB4-203ENST00000508126 LY75O60449 1722 aa20.12■□□□□ 0.81
SPSB4-203ENST00000508126 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
SPSB4-203ENST00000508126 SURF6O75683 361 aaKnown RBP20.12■□□□□ 0.81
SPSB4-203ENST00000508126 CASP7P55210 303 aa20.12■□□□□ 0.81
SPSB4-203ENST00000508126 HLFQ16534 295 aa20.12■□□□□ 0.81
SPSB4-203ENST00000508126 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
SPSB4-203ENST00000508126 BACH2Q9BYV9 841 aa20.11■□□□□ 0.81
SPSB4-203ENST00000508126 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
SPSB4-203ENST00000508126 KCNQ4P56696 695 aa20.1■□□□□ 0.81
SPSB4-203ENST00000508126 RABL6Q3YEC7 729 aaPredicted RBP20.1■□□□□ 0.81
SPSB4-203ENST00000508126 JARID2Q92833 1246 aaPredicted RBP20.1■□□□□ 0.81
SPSB4-203ENST00000508126 SMARCA5O60264 1052 aaPredicted RBP20.09■□□□□ 0.81
SPSB4-203ENST00000508126 NOP58Q9Y2X3 529 aaKnown RBP20.09■□□□□ 0.81
SPSB4-203ENST00000508126 CAMTA2O94983 1202 aa20.08■□□□□ 0.81
SPSB4-203ENST00000508126 PCCAP05165 728 aaPredicted RBP20.08■□□□□ 0.81
SPSB4-203ENST00000508126 GPTP24298 496 aa20.08■□□□□ 0.81
SPSB4-203ENST00000508126 EPHA10Q5JZY3 1008 aa20.08■□□□□ 0.81
SPSB4-203ENST00000508126 NLRP10Q86W26 655 aa20.08■□□□□ 0.81
SPSB4-203ENST00000508126 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.81
SPSB4-203ENST00000508126 NUP98P52948 1817 aa20.08■□□□□ 0.8
SPSB4-203ENST00000508126 OS9Q13438 667 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms