RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 UBR2Q8IWV8 1755 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 ARFGEF2Q9Y6D5 1785 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 A0A087WZG4 1122 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 C21orf2O43822 256 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
CAST-220ENST00000508117 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
CAST-220ENST00000508117 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
CAST-220ENST00000508117 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
CAST-220ENST00000508117 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
CAST-220ENST00000508117 VEGFBP49765 207 aa12.51□□□□□ -0.41
CAST-220ENST00000508117 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
CAST-220ENST00000508117 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.411e-7■□□□□ 8.8
CAST-220ENST00000508117 ITGBL1O95965 494 aaPredicted RBP12.5□□□□□ -0.41
CAST-220ENST00000508117 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
CAST-220ENST00000508117 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
CAST-220ENST00000508117 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
CAST-220ENST00000508117 SLX4Q8IY92 1834 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 RASSF10A6NK89 507 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
CAST-220ENST00000508117 STARD3NLO95772 234 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 IL13P35225 146 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 LBX1P52954 281 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 SLC39A6Q13433 755 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 STYK1Q6J9G0 422 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 PRR5LQ6MZQ0 368 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 ABHD8Q96I13 439 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
CAST-220ENST00000508117 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
CAST-220ENST00000508117 SRGNP10124 158 aa12.47□□□□□ -0.41
CAST-220ENST00000508117 HSPA8P11142 646 aaKnown RBP12.47□□□□□ -0.41
CAST-220ENST00000508117 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
CAST-220ENST00000508117 RGS19P49795 217 aa12.47□□□□□ -0.41
CAST-220ENST00000508117 MAP2K1Q02750 393 aaPredicted RBP12.47□□□□□ -0.41
CAST-220ENST00000508117 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
CAST-220ENST00000508117 MASTLQ96GX5 879 aa12.47□□□□□ -0.41
CAST-220ENST00000508117 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.41
CAST-220ENST00000508117 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
CAST-220ENST00000508117 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
CAST-220ENST00000508117 PNMA8AQ86V59 439 aaPredicted RBP12.46□□□□□ -0.41
CAST-220ENST00000508117 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.41
CAST-220ENST00000508117 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
CAST-220ENST00000508117 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
CAST-220ENST00000508117 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
CAST-220ENST00000508117 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
CAST-220ENST00000508117 MORC1Q86VD1 984 aa12.45□□□□□ -0.42
CAST-220ENST00000508117 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
CAST-220ENST00000508117 PANK3Q9H999 370 aa12.45□□□□□ -0.42
CAST-220ENST00000508117 HACL1Q9UJ83 578 aa12.45□□□□□ -0.42
CAST-220ENST00000508117 TIMELESSQ9UNS1 1208 aa12.45□□□□□ -0.42
CAST-220ENST00000508117 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
CAST-220ENST00000508117 ST5P78524 1137 aa12.44□□□□□ -0.42
CAST-220ENST00000508117 MLLT1Q03111 559 aaPredicted RBP12.44□□□□□ -0.42
CAST-220ENST00000508117 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
CAST-220ENST00000508117 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
CAST-220ENST00000508117 SETDB2Q96T68 719 aa12.44□□□□□ -0.42
CAST-220ENST00000508117 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
CAST-220ENST00000508117 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
CAST-220ENST00000508117 EPHX2P34913 555 aa12.43□□□□□ -0.42
CAST-220ENST00000508117 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
CAST-220ENST00000508117 MIER1Q8N108 512 aa12.43□□□□□ -0.42
CAST-220ENST00000508117 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
CAST-220ENST00000508117 BCORQ6W2J9 1755 aa12.43□□□□□ -0.42
CAST-220ENST00000508117 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
CAST-220ENST00000508117 CAMTA2O94983 1202 aa12.42□□□□□ -0.42
CAST-220ENST00000508117 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
CAST-220ENST00000508117 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
CAST-220ENST00000508117 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
CAST-220ENST00000508117 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
CAST-220ENST00000508117 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
CAST-220ENST00000508117 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
CAST-220ENST00000508117 FZD9O00144 591 aa12.41□□□□□ -0.42
CAST-220ENST00000508117 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
CAST-220ENST00000508117 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
CAST-220ENST00000508117 NPM2Q86SE8 214 aaKnown RBP12.41□□□□□ -0.42
CAST-220ENST00000508117 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
CAST-220ENST00000508117 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
CAST-220ENST00000508117 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
CAST-220ENST00000508117 RGL2O15211 777 aa12.4□□□□□ -0.42
CAST-220ENST00000508117 NPHP1O15259 732 aa12.4□□□□□ -0.42
CAST-220ENST00000508117 NPR1P16066 1061 aa12.4□□□□□ -0.42
CAST-220ENST00000508117 GPC2Q8N158 579 aa12.4□□□□□ -0.42
CAST-220ENST00000508117 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
CAST-220ENST00000508117 ECE1P42892 770 aa12.39□□□□□ -0.43
CAST-220ENST00000508117 MAP1SQ66K74 1059 aaPredicted RBP12.39□□□□□ -0.43
CAST-220ENST00000508117 BEGAINQ9BUH8 593 aa12.39□□□□□ -0.43
CAST-220ENST00000508117 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
CAST-220ENST00000508117 ABT1Q9ULW3 272 aaKnown RBP12.39□□□□□ -0.43
CAST-220ENST00000508117 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
CAST-220ENST00000508117 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
CAST-220ENST00000508117 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
CAST-220ENST00000508117 HMOX1P09601 288 aa12.38□□□□□ -0.43
CAST-220ENST00000508117 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
CAST-220ENST00000508117 FMNL2Q96PY5 1086 aa12.38□□□□□ -0.43
CAST-220ENST00000508117 ZNF277Q9NRM2 450 aaPredicted RBP12.38□□□□□ -0.43
CAST-220ENST00000508117 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms