RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
HMGCR-206ENST00000508070 C7orf43Q8WVR3 580 aa10.61□□□□□ -0.71
HMGCR-206ENST00000508070 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-206ENST00000508070 VEGFBP49765 207 aa10.6□□□□□ -0.71
HMGCR-206ENST00000508070 CCDC93Q567U6 631 aa10.6□□□□□ -0.71
HMGCR-206ENST00000508070 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
HMGCR-206ENST00000508070 DICER1Q9UPY3 1922 aaKnown RBP10.59□□□□□ -0.71
HMGCR-206ENST00000508070 KLRG2A4D1S0 409 aaPredicted RBP10.59□□□□□ -0.71
HMGCR-206ENST00000508070 RGL2O15211 777 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 NPR1P16066 1061 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 FKBP4Q02790 459 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGCR-206ENST00000508070 TPTE2Q6XPS3 522 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 PNMA8AQ86V59 439 aaPredicted RBP10.59□□□□□ -0.71
HMGCR-206ENST00000508070 NBPF5PQ86XG9 351 aaPredicted RBP10.59□□□□□ -0.71
HMGCR-206ENST00000508070 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
HMGCR-206ENST00000508070 RTKN2Q8IZC4 609 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 HACL1Q9UJ83 578 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 FER1L6Q2WGJ9 1857 aa10.59□□□□□ -0.71
HMGCR-206ENST00000508070 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
HMGCR-206ENST00000508070 PER1O15534 1290 aaPredicted RBP10.58□□□□□ -0.72
HMGCR-206ENST00000508070 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
HMGCR-206ENST00000508070 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
HMGCR-206ENST00000508070 RASSF10A6NK89 507 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 BTBD11A6QL63 1104 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 EPHX2P34913 555 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 EAPPQ56P03 285 aaPredicted RBP10.57□□□□□ -0.72
HMGCR-206ENST00000508070 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 PCGF6Q9BYE7 350 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 ZNF277Q9NRM2 450 aaPredicted RBP10.57□□□□□ -0.72
HMGCR-206ENST00000508070 USP16Q9Y5T5 823 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
HMGCR-206ENST00000508070 SLX4Q8IY92 1834 aa10.56□□□□□ -0.72
HMGCR-206ENST00000508070 FZD9O00144 591 aa10.56□□□□□ -0.72
HMGCR-206ENST00000508070 U2SURPO15042 1029 aaKnown RBP10.56□□□□□ -0.72
HMGCR-206ENST00000508070 KCNQ3O43525 872 aa10.56□□□□□ -0.72
HMGCR-206ENST00000508070 SNRPA1P09661 255 aaKnown RBP10.56□□□□□ -0.72
HMGCR-206ENST00000508070 LBX1P52954 281 aa10.56□□□□□ -0.72
HMGCR-206ENST00000508070 MAP2K1Q02750 393 aaPredicted RBP10.56□□□□□ -0.72
HMGCR-206ENST00000508070 SYNE4Q8N205 404 aa10.56□□□□□ -0.72
HMGCR-206ENST00000508070 UBR2Q8IWV8 1755 aa10.56□□□□□ -0.72
HMGCR-206ENST00000508070 CEMIPQ8WUJ3 1361 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
HMGCR-206ENST00000508070 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
HMGCR-206ENST00000508070 CC2D2BQ6DHV5 1058 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 GPC2Q8N158 579 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 SCN4AP35499 1836 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 PCNTO95613 3336 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 ZNF541Q9H0D2 1346 aa10.55□□□□□ -0.72
HMGCR-206ENST00000508070 HSPA8P11142 646 aaKnown RBP10.54□□□□□ -0.72
HMGCR-206ENST00000508070 MAP1SQ66K74 1059 aaPredicted RBP10.54□□□□□ -0.72
HMGCR-206ENST00000508070 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
HMGCR-206ENST00000508070 WDR33Q9C0J8 1336 aaKnown RBP10.54□□□□□ -0.72
HMGCR-206ENST00000508070 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-206ENST00000508070 EIF6P56537 245 aaKnown RBP10.53□□□□□ -0.72
HMGCR-206ENST00000508070 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
HMGCR-206ENST00000508070 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
HMGCR-206ENST00000508070 PHACTR3Q96KR7 559 aa10.53□□□□□ -0.72
HMGCR-206ENST00000508070 PSMD1Q99460 953 aa10.53□□□□□ -0.72
HMGCR-206ENST00000508070 ABT1Q9ULW3 272 aaKnown RBP10.53□□□□□ -0.72
HMGCR-206ENST00000508070 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
HMGCR-206ENST00000508070 COL11A2P13942 1736 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-206ENST00000508070 NPC1L1Q9UHC9 1359 aa10.52□□□□□ -0.72
HMGCR-206ENST00000508070 NBPF26B4DH59 902 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 ECE1P42892 770 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 PIP4K2AP48426 406 aaPredicted RBP10.52□□□□□ -0.73
HMGCR-206ENST00000508070 NBPF10Q6P3W6 841 aaKnown RBP10.52□□□□□ -0.73
HMGCR-206ENST00000508070 OLFM4Q6UX06 510 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 NBPF15Q8N660 670 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
HMGCR-206ENST00000508070 BEGAINQ9BUH8 593 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 NYXQ9GZU5 481 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 DDX21Q9NR30 783 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMGCR-206ENST00000508070 SCN7AQ01118 1682 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 RNF123Q5XPI4 1314 aa10.52□□□□□ -0.73
HMGCR-206ENST00000508070 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
HMGCR-206ENST00000508070 PRAMEF22A3QJZ6 481 aa10.51□□□□□ -0.73
HMGCR-206ENST00000508070 FAM177BA6PVY3 158 aa10.51□□□□□ -0.73
HMGCR-206ENST00000508070 HTATSF1O43719 755 aaKnown RBP10.51□□□□□ -0.73
HMGCR-206ENST00000508070 SLC34A2O95436 690 aa10.51□□□□□ -0.73
HMGCR-206ENST00000508070 LMOD1P29536 600 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-206ENST00000508070 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
HMGCR-206ENST00000508070 CFAP53Q96M91 514 aa10.51□□□□□ -0.73
HMGCR-206ENST00000508070 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
HMGCR-206ENST00000508070 ERVV-1B6SEH8 477 aa10.5□□□□□ -0.73
HMGCR-206ENST00000508070 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
HMGCR-206ENST00000508070 RGS19P49795 217 aa10.5□□□□□ -0.73
HMGCR-206ENST00000508070 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
HMGCR-206ENST00000508070 USP50Q70EL3 339 aaPredicted RBP10.5□□□□□ -0.73
HMGCR-206ENST00000508070 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
HMGCR-206ENST00000508070 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
HMGCR-206ENST00000508070 RSPH6AQ9H0K4 717 aa10.5□□□□□ -0.73
HMGCR-206ENST00000508070 GJA3Q9Y6H8 435 aa10.5□□□□□ -0.73
HMGCR-206ENST00000508070 MAP2K2P36507 400 aa10.49□□□□□ -0.73
HMGCR-206ENST00000508070 TAF7Q15545 349 aaPredicted RBP10.49□□□□□ -0.73
HMGCR-206ENST00000508070 HLFQ16534 295 aa10.49□□□□□ -0.73
HMGCR-206ENST00000508070 ARFGEF2Q9Y6D5 1785 aa10.49□□□□□ -0.73
HMGCR-206ENST00000508070 COL3A1P02461 1466 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms