RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
COPS4-204ENST00000506443 SULT6B1Q6IMI4 303 aa12.31□□□□□ -0.44
COPS4-204ENST00000506443 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.441e-7■■□□□ 12.1
COPS4-204ENST00000506443 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
COPS4-204ENST00000506443 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
COPS4-204ENST00000506443 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
COPS4-204ENST00000506443 H0YIN7 160 aa12.29□□□□□ -0.44
COPS4-204ENST00000506443 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
COPS4-204ENST00000506443 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
COPS4-204ENST00000506443 ITGBL1O95965 494 aaPredicted RBP12.28□□□□□ -0.44
COPS4-204ENST00000506443 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
COPS4-204ENST00000506443 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
COPS4-204ENST00000506443 EAPPQ56P03 285 aaPredicted RBP12.28□□□□□ -0.44
COPS4-204ENST00000506443 TAOK3Q9H2K8 898 aa12.28□□□□□ -0.44
COPS4-204ENST00000506443 TAF1DQ9H5J8 278 aaPredicted RBP12.28□□□□□ -0.44
COPS4-204ENST00000506443 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
COPS4-204ENST00000506443 ZNF330Q9Y3S2 320 aaPredicted RBP12.28□□□□□ -0.44
COPS4-204ENST00000506443 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
COPS4-204ENST00000506443 HMOX1P09601 288 aa12.27□□□□□ -0.45
COPS4-204ENST00000506443 MAP1SQ66K74 1059 aaPredicted RBP12.27□□□□□ -0.45
COPS4-204ENST00000506443 PRPF40BQ6NWY9 871 aaKnown RBP12.27□□□□□ -0.45
COPS4-204ENST00000506443 TBC1D2BQ9UPU7 963 aa12.27□□□□□ -0.45
COPS4-204ENST00000506443 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
COPS4-204ENST00000506443 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.45
COPS4-204ENST00000506443 IL13P35225 146 aa12.26□□□□□ -0.45
COPS4-204ENST00000506443 PANK3Q9H999 370 aa12.26□□□□□ -0.45
COPS4-204ENST00000506443 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
COPS4-204ENST00000506443 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
COPS4-204ENST00000506443 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
COPS4-204ENST00000506443 LDHDQ86WU2 507 aa12.25□□□□□ -0.45
COPS4-204ENST00000506443 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
COPS4-204ENST00000506443 ZNF277Q9NRM2 450 aaPredicted RBP12.25□□□□□ -0.45
COPS4-204ENST00000506443 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
COPS4-204ENST00000506443 TMEM88BA6NKF7 163 aa12.24□□□□□ -0.45
COPS4-204ENST00000506443 GRM1Q13255 1194 aa12.24□□□□□ -0.45
COPS4-204ENST00000506443 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
COPS4-204ENST00000506443 AKAP4Q5JQC9 854 aa12.24□□□□□ -0.45
COPS4-204ENST00000506443 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
COPS4-204ENST00000506443 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
COPS4-204ENST00000506443 CASP8AP2Q9UKL3 1982 aa12.23□□□□□ -0.45
COPS4-204ENST00000506443 SNED1Q8TER0 1413 aa12.23□□□□□ -0.45
COPS4-204ENST00000506443 CCDC85CA6NKD9 419 aa12.23□□□□□ -0.45
COPS4-204ENST00000506443 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
COPS4-204ENST00000506443 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
COPS4-204ENST00000506443 BRIP1Q9BX63 1249 aa12.23□□□□□ -0.45
COPS4-204ENST00000506443 TNRC18O15417 2968 aaPredicted RBP12.23□□□□□ -0.45
COPS4-204ENST00000506443 WDR33Q9C0J8 1336 aaKnown RBP12.22□□□□□ -0.45
COPS4-204ENST00000506443 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 RASSF10A6NK89 507 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 KCNQ3O43525 872 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 SRGNP10124 158 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 CNBD1Q8NA66 436 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 C7orf43Q8WVR3 580 aa12.22□□□□□ -0.45
COPS4-204ENST00000506443 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.45
COPS4-204ENST00000506443 A1BGP04217 495 aa12.21□□□□□ -0.45
COPS4-204ENST00000506443 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
COPS4-204ENST00000506443 HEG1Q9ULI3 1381 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 TRAF5O00463 557 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 AOC2O75106 756 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 EPHX2P34913 555 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 PDE6BP35913 854 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
COPS4-204ENST00000506443 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
COPS4-204ENST00000506443 ABCC12Q96J65 1359 aa12.19□□□□□ -0.46
COPS4-204ENST00000506443 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
COPS4-204ENST00000506443 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
COPS4-204ENST00000506443 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
COPS4-204ENST00000506443 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
COPS4-204ENST00000506443 HACL1Q9UJ83 578 aa12.19□□□□□ -0.46
COPS4-204ENST00000506443 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
COPS4-204ENST00000506443 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
COPS4-204ENST00000506443 HSPA5P11021 654 aaKnown RBP12.18□□□□□ -0.46
COPS4-204ENST00000506443 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
COPS4-204ENST00000506443 MLLT1Q03111 559 aaPredicted RBP12.18□□□□□ -0.46
COPS4-204ENST00000506443 EVX2Q03828 476 aa12.18□□□□□ -0.46
COPS4-204ENST00000506443 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
COPS4-204ENST00000506443 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
COPS4-204ENST00000506443 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
COPS4-204ENST00000506443 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
COPS4-204ENST00000506443 CCDC93Q567U6 631 aa12.17□□□□□ -0.46
COPS4-204ENST00000506443 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
COPS4-204ENST00000506443 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
COPS4-204ENST00000506443 MASTLQ96GX5 879 aa12.17□□□□□ -0.46
COPS4-204ENST00000506443 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
COPS4-204ENST00000506443 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
COPS4-204ENST00000506443 NPHP1O15259 732 aa12.16□□□□□ -0.46
COPS4-204ENST00000506443 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
COPS4-204ENST00000506443 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
COPS4-204ENST00000506443 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
COPS4-204ENST00000506443 EPS15P42566 896 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 SCNN1DP51172 638 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 ST5P78524 1137 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 CST9Q5W186 159 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
COPS4-204ENST00000506443 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
COPS4-204ENST00000506443 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms