RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ORAI2Q96SN7 254 aa18.91■□□□□ 0.62
SCLT1-208ENST00000506368 SH2B1Q9NRF2 756 aaPredicted RBP18.91■□□□□ 0.62
SCLT1-208ENST00000506368 ITSN1Q15811 1721 aa18.9■□□□□ 0.62
SCLT1-208ENST00000506368 AP5Z1O43299 807 aa18.9■□□□□ 0.62
SCLT1-208ENST00000506368 UPF3BQ9BZI7 483 aaKnown RBP18.9■□□□□ 0.62
SCLT1-208ENST00000506368 TSPYL1Q9H0U9 437 aa18.9■□□□□ 0.62
SCLT1-208ENST00000506368 CALCOCO1Q9P1Z2 691 aa18.9■□□□□ 0.62
SCLT1-208ENST00000506368 SLAIN2Q9P270 581 aa18.9■□□□□ 0.62
SCLT1-208ENST00000506368 DCCP43146 1447 aa18.9■□□□□ 0.62
SCLT1-208ENST00000506368 FIBPO43427 364 aa18.89■□□□□ 0.62
SCLT1-208ENST00000506368 CABP1Q9NZU7 370 aa18.89■□□□□ 0.62
SCLT1-208ENST00000506368 N4BP2Q86UW6 1770 aaPredicted RBP18.89■□□□□ 0.61
SCLT1-208ENST00000506368 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
SCLT1-208ENST00000506368 PTGS1P23219 599 aa18.89■□□□□ 0.61
SCLT1-208ENST00000506368 NOL8Q76FK4 1167 aaKnown RBP18.89■□□□□ 0.61
SCLT1-208ENST00000506368 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
SCLT1-208ENST00000506368 NUP62CLQ9H1M0 184 aa18.89■□□□□ 0.61
SCLT1-208ENST00000506368 FAM53CQ9NYF3 392 aa18.89■□□□□ 0.61
SCLT1-208ENST00000506368 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
SCLT1-208ENST00000506368 FOXD4L6Q3SYB3 417 aaPredicted RBP18.88■□□□□ 0.61
SCLT1-208ENST00000506368 FOXD4L3Q6VB84 417 aaPredicted RBP18.88■□□□□ 0.61
SCLT1-208ENST00000506368 SPC24Q8NBT2 197 aa18.88■□□□□ 0.61
SCLT1-208ENST00000506368 RILPL2Q969X0 211 aa18.88■□□□□ 0.61
SCLT1-208ENST00000506368 KIF2AO00139 706 aaPredicted RBP18.88■□□□□ 0.61
SCLT1-208ENST00000506368 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
SCLT1-208ENST00000506368 PLA2G4DQ86XP0 818 aa18.88■□□□□ 0.61
SCLT1-208ENST00000506368 DDX17Q92841 729 aaKnown RBP18.88■□□□□ 0.61
SCLT1-208ENST00000506368 TIGD1Q96MW7 591 aa18.88■□□□□ 0.61
SCLT1-208ENST00000506368 DDX19AQ9NUU7 478 aaKnown RBP18.88■□□□□ 0.61
SCLT1-208ENST00000506368 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
SCLT1-208ENST00000506368 TDRD7Q8NHU6 1098 aaKnown RBP18.87■□□□□ 0.61
SCLT1-208ENST00000506368 KRT85P78386 507 aa18.86■□□□□ 0.61
SCLT1-208ENST00000506368 ZSCAN25Q6NSZ9 544 aa18.86■□□□□ 0.61
SCLT1-208ENST00000506368 RBM43Q6ZSC3 357 aaKnown RBP18.86■□□□□ 0.61
SCLT1-208ENST00000506368 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
SCLT1-208ENST00000506368 TYRO3Q06418 890 aa18.86■□□□□ 0.61
SCLT1-208ENST00000506368 MTMR6Q9Y217 621 aa18.86■□□□□ 0.61
SCLT1-208ENST00000506368 SGSM2O43147 1006 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 TOM1O60784 492 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 ZNF75DP51815 510 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 AK2P54819 239 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 DNAJC2Q99543 621 aaKnown RBP18.85■□□□□ 0.61
SCLT1-208ENST00000506368 TM6SF1Q9BZW5 370 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 KCND1Q9NSA2 647 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 SNX14Q9Y5W7 946 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 MRVI1Q9Y6F6 885 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 PDCP20941 246 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 PDE4CQ08493 712 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
SCLT1-208ENST00000506368 C16orf45Q96MC5 204 aaPredicted RBP18.85■□□□□ 0.61
SCLT1-208ENST00000506368 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
SCLT1-208ENST00000506368 ROBO1Q9Y6N7 1651 aa18.84■□□□□ 0.61
SCLT1-208ENST00000506368 SOS1Q07889 1333 aaPredicted RBP18.84■□□□□ 0.61
SCLT1-208ENST00000506368 TPD52L1Q16890 204 aaPredicted RBP18.84■□□□□ 0.61
SCLT1-208ENST00000506368 CEP135Q66GS9 1140 aa18.84■□□□□ 0.61
SCLT1-208ENST00000506368 BRINP3Q76B58 766 aa18.84■□□□□ 0.61
SCLT1-208ENST00000506368 DRC7Q8IY82 874 aa18.84■□□□□ 0.61
SCLT1-208ENST00000506368 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
SCLT1-208ENST00000506368 SLC4A2P04920 1241 aa18.83■□□□□ 0.61
SCLT1-208ENST00000506368 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.61
SCLT1-208ENST00000506368 SCAND2PQ9GZW5 306 aaPredicted RBP18.83■□□□□ 0.61
SCLT1-208ENST00000506368 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.61
SCLT1-208ENST00000506368 EMILIN1Q9Y6C2 1016 aa18.83■□□□□ 0.61
SCLT1-208ENST00000506368 FAM83GA6ND36 823 aa18.83■□□□□ 0.6
SCLT1-208ENST00000506368 TUBB4AP04350 444 aa18.83■□□□□ 0.6
SCLT1-208ENST00000506368 DNM1Q05193 864 aaKnown RBP18.83■□□□□ 0.6
SCLT1-208ENST00000506368 SARM1Q6SZW1 724 aa18.83■□□□□ 0.6
SCLT1-208ENST00000506368 IPO4Q8TEX9 1081 aaKnown RBP18.83■□□□□ 0.6
SCLT1-208ENST00000506368 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
SCLT1-208ENST00000506368 RUFY3Q7L099 469 aa18.82■□□□□ 0.6
SCLT1-208ENST00000506368 TRIM5Q9C035 493 aa18.82■□□□□ 0.6
SCLT1-208ENST00000506368 MON2Q7Z3U7 1717 aa18.82■□□□□ 0.6
SCLT1-208ENST00000506368 CRYBG1Q9Y4K1 1723 aa18.82■□□□□ 0.6
SCLT1-208ENST00000506368 GJB2P29033 226 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 DHX8Q14562 1220 aaKnown RBP18.81■□□□□ 0.6
SCLT1-208ENST00000506368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCLT1-208ENST00000506368 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 TNMDQ9H2S6 317 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 FOXO3O43524 673 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 LSG1Q9H089 658 aaKnown RBP18.81■□□□□ 0.6
SCLT1-208ENST00000506368 CBX8Q9HC52 389 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 CACNA1FO60840 1977 aa18.81■□□□□ 0.6
SCLT1-208ENST00000506368 RUFY2Q8WXA3 655 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 MRFAP1L1Q96HT8 127 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 COG3Q96JB2 828 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 PHF8Q9UPP1 1060 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 CRB1P82279 1406 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
SCLT1-208ENST00000506368 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
SCLT1-208ENST00000506368 NYAP1Q6ZVC0 841 aa18.79■□□□□ 0.6
SCLT1-208ENST00000506368 KCNB2Q92953 911 aa18.79■□□□□ 0.6
SCLT1-208ENST00000506368 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 BMS1Q14692 1282 aaKnown RBP18.78■□□□□ 0.6
SCLT1-208ENST00000506368 PTPN14Q15678 1187 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms