RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CNKSR1Q969H4 720 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 BRIP1Q9BX63 1249 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
SNF8-204ENST00000506104 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
SNF8-204ENST00000506104 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
SNF8-204ENST00000506104 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
SNF8-204ENST00000506104 EAPPQ56P03 285 aaPredicted RBP11.05□□□□□ -0.64
SNF8-204ENST00000506104 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
SNF8-204ENST00000506104 IL6STP40189 918 aaPredicted RBP11.04□□□□□ -0.64
SNF8-204ENST00000506104 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SNF8-204ENST00000506104 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
SNF8-204ENST00000506104 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
SNF8-204ENST00000506104 RTF1Q92541 710 aaKnown RBP11.04□□□□□ -0.64
SNF8-204ENST00000506104 PDZRN3Q9UPQ7 1066 aa11.04□□□□□ -0.64
SNF8-204ENST00000506104 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
SNF8-204ENST00000506104 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
SNF8-204ENST00000506104 POTEJP0CG39 1038 aa11.03□□□□□ -0.64
SNF8-204ENST00000506104 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
SNF8-204ENST00000506104 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNF8-204ENST00000506104 MCM10Q7L590 875 aa11.03□□□□□ -0.64
SNF8-204ENST00000506104 MASTLQ96GX5 879 aa11.03□□□□□ -0.64
SNF8-204ENST00000506104 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
SNF8-204ENST00000506104 POTECB2RU33 542 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 STYK1Q6J9G0 422 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 PHACTR3Q96KR7 559 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 USP16Q9Y5T5 823 aa11.02□□□□□ -0.65
SNF8-204ENST00000506104 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
SNF8-204ENST00000506104 SRGNP10124 158 aa11.01□□□□□ -0.65
SNF8-204ENST00000506104 DCTN1Q14203 1278 aa11.01□□□□□ -0.65
SNF8-204ENST00000506104 CCDC93Q567U6 631 aa11.01□□□□□ -0.65
SNF8-204ENST00000506104 SOGA3Q5TF21 947 aa11.01□□□□□ -0.65
SNF8-204ENST00000506104 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
SNF8-204ENST00000506104 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNF8-204ENST00000506104 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
SNF8-204ENST00000506104 TCERG1O14776 1098 aaKnown RBP11□□□□□ -0.65
SNF8-204ENST00000506104 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
SNF8-204ENST00000506104 OLFM4Q6UX06 510 aa11□□□□□ -0.65
SNF8-204ENST00000506104 AIDAQ96BJ3 306 aa11□□□□□ -0.65
SNF8-204ENST00000506104 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
SNF8-204ENST00000506104 NEFMP07197 916 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 SNRPA1P09661 255 aaKnown RBP10.99□□□□□ -0.65
SNF8-204ENST00000506104 NPR1P16066 1061 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 TPTE2Q6XPS3 522 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 PAXIP1Q6ZW49 1069 aaPredicted RBP10.99□□□□□ -0.65
SNF8-204ENST00000506104 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 MIS18AQ9NYP9 233 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 SCN4AP35499 1836 aa10.99□□□□□ -0.65
SNF8-204ENST00000506104 ZBTB22O15209 634 aa10.98□□□□□ -0.65
SNF8-204ENST00000506104 GRM1Q13255 1194 aa10.98□□□□□ -0.65
SNF8-204ENST00000506104 RSPH6AQ9H0K4 717 aa10.98□□□□□ -0.65
SNF8-204ENST00000506104 RRP7AQ9Y3A4 280 aaKnown RBP10.98□□□□□ -0.65
SNF8-204ENST00000506104 ZNF541Q9H0D2 1346 aa10.98□□□□□ -0.65
SNF8-204ENST00000506104 FKBP4Q02790 459 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNF8-204ENST00000506104 LDHDQ86WU2 507 aa10.97□□□□□ -0.65
SNF8-204ENST00000506104 SYNE4Q8N205 404 aa10.97□□□□□ -0.65
SNF8-204ENST00000506104 TAF1DQ9H5J8 278 aaPredicted RBP10.97□□□□□ -0.65
SNF8-204ENST00000506104 HACL1Q9UJ83 578 aa10.97□□□□□ -0.65
SNF8-204ENST00000506104 LTBP3Q9NS15 1303 aa10.97□□□□□ -0.65
SNF8-204ENST00000506104 NUP98P52948 1817 aa10.97□□□□□ -0.65
SNF8-204ENST00000506104 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 FOXN1O15353 648 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 MYL6BP14649 208 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 MAP1SQ66K74 1059 aaPredicted RBP10.96□□□□□ -0.65
SNF8-204ENST00000506104 NUTM1Q86Y26 1132 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 RTKN2Q8IZC4 609 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 JDP2Q8WYK2 163 aa10.96□□□□□ -0.65
SNF8-204ENST00000506104 RPGRQ92834 1020 aaKnown RBP10.96□□□□□ -0.65
SNF8-204ENST00000506104 ABT1Q9ULW3 272 aaKnown RBP10.96□□□□□ -0.65
SNF8-204ENST00000506104 CEMIPQ8WUJ3 1361 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 TMEM88BA6NKF7 163 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 GPTP24298 496 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 ALDH1B1P30837 517 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 EPHX2P34913 555 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 IARSP41252 1262 aaKnown RBP10.95□□□□□ -0.66
SNF8-204ENST00000506104 HLFQ16534 295 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 CLEC4GQ6UXB4 293 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 KIF6Q6ZMV9 814 aa10.95□□□□□ -0.66
SNF8-204ENST00000506104 NBPF26B4DH59 902 aa10.94□□□□□ -0.66
SNF8-204ENST00000506104 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
SNF8-204ENST00000506104 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
SNF8-204ENST00000506104 VEGFBP49765 207 aa10.94□□□□□ -0.66
SNF8-204ENST00000506104 EIF6P56537 245 aaKnown RBP10.94□□□□□ -0.66
SNF8-204ENST00000506104 TAF7Q15545 349 aaPredicted RBP10.94□□□□□ -0.66
SNF8-204ENST00000506104 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
SNF8-204ENST00000506104 NBPF15Q8N660 670 aa10.94□□□□□ -0.66
SNF8-204ENST00000506104 ZBTB3Q9H5J0 574 aa10.94□□□□□ -0.66
SNF8-204ENST00000506104 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
SNF8-204ENST00000506104 LAMB4A4D0S4 1761 aa10.94□□□□□ -0.66
SNF8-204ENST00000506104 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
SNF8-204ENST00000506104 LBX1P52954 281 aa10.93□□□□□ -0.66
SNF8-204ENST00000506104 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
SNF8-204ENST00000506104 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
SNF8-204ENST00000506104 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms