RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 LTBP3Q9NS15 1303 aa20.69■□□□□ 0.9
PDCD6-203ENST00000505526 TEFQ10587 303 aa20.69■□□□□ 0.9
PDCD6-203ENST00000505526 CHADLQ6NUI6 762 aa20.69■□□□□ 0.9
PDCD6-203ENST00000505526 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
PDCD6-203ENST00000505526 DICER1Q9UPY3 1922 aaKnown RBP20.69■□□□□ 0.9
PDCD6-203ENST00000505526 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
PDCD6-203ENST00000505526 IL17REQ8NFR9 667 aa20.69■□□□□ 0.9
PDCD6-203ENST00000505526 CREBZFQ9NS37 354 aa20.69■□□□□ 0.9
PDCD6-203ENST00000505526 CNKSR1Q969H4 720 aa20.68■□□□□ 0.9
PDCD6-203ENST00000505526 SETDB2Q96T68 719 aa20.68■□□□□ 0.9
PDCD6-203ENST00000505526 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
PDCD6-203ENST00000505526 NPHP1O15259 732 aa20.67■□□□□ 0.9
PDCD6-203ENST00000505526 DDNO94850 711 aaPredicted RBP20.67■□□□□ 0.9
PDCD6-203ENST00000505526 STYK1Q6J9G0 422 aa20.67■□□□□ 0.9
PDCD6-203ENST00000505526 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
PDCD6-203ENST00000505526 CNBD1Q8NA66 436 aa20.67■□□□□ 0.9
PDCD6-203ENST00000505526 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
PDCD6-203ENST00000505526 A1BGP04217 495 aa20.66■□□□□ 0.9
PDCD6-203ENST00000505526 POTEIP0CG38 1075 aa20.66■□□□□ 0.9
PDCD6-203ENST00000505526 POTEJP0CG39 1038 aa20.66■□□□□ 0.9
PDCD6-203ENST00000505526 CCDC146Q8IYE0 955 aa20.66■□□□□ 0.9
PDCD6-203ENST00000505526 FMNL2Q96PY5 1086 aa20.66■□□□□ 0.9
PDCD6-203ENST00000505526 MKRN1Q9UHC7 482 aaKnown RBP20.66■□□□□ 0.9
PDCD6-203ENST00000505526 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
PDCD6-203ENST00000505526 SRGNP10124 158 aa20.65■□□□□ 0.9
PDCD6-203ENST00000505526 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
PDCD6-203ENST00000505526 ST5P78524 1137 aa20.65■□□□□ 0.9
PDCD6-203ENST00000505526 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
PDCD6-203ENST00000505526 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
PDCD6-203ENST00000505526 SOGA3Q5TF21 947 aa20.64■□□□□ 0.89
PDCD6-203ENST00000505526 MASTLQ96GX5 879 aa20.64■□□□□ 0.89
PDCD6-203ENST00000505526 SLX4Q8IY92 1834 aa20.64■□□□□ 0.89
PDCD6-203ENST00000505526 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
PDCD6-203ENST00000505526 SIPA1L3O60292 1781 aaPredicted RBP20.63■□□□□ 0.89
PDCD6-203ENST00000505526 DZIP3Q86Y13 1208 aaKnown RBP20.62■□□□□ 0.89
PDCD6-203ENST00000505526 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
PDCD6-203ENST00000505526 RUNDC1Q96C34 613 aa20.62■□□□□ 0.89
PDCD6-203ENST00000505526 CACNA1SQ13698 1873 aa20.61■□□□□ 0.89
PDCD6-203ENST00000505526 IQCA1LA6NCM1 817 aa20.61■□□□□ 0.89
PDCD6-203ENST00000505526 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
PDCD6-203ENST00000505526 KCNQ3O43525 872 aa20.6■□□□□ 0.89
PDCD6-203ENST00000505526 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
PDCD6-203ENST00000505526 ARFGEF2Q9Y6D5 1785 aa20.6■□□□□ 0.89
PDCD6-203ENST00000505526 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
PDCD6-203ENST00000505526 CNTNAP1P78357 1384 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 NEFMP07197 916 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 C7orf43Q8WVR3 580 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 L3MBTL3Q96JM7 780 aaPredicted RBP20.59■□□□□ 0.89
PDCD6-203ENST00000505526 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 BCORQ6W2J9 1755 aa20.59■□□□□ 0.89
PDCD6-203ENST00000505526 CCDC93Q567U6 631 aa20.58■□□□□ 0.89
PDCD6-203ENST00000505526 NBPF5PQ86XG9 351 aaPredicted RBP20.58■□□□□ 0.89
PDCD6-203ENST00000505526 TAF1DQ9H5J8 278 aaPredicted RBP20.58■□□□□ 0.89
PDCD6-203ENST00000505526 USP16Q9Y5T5 823 aa20.58■□□□□ 0.89
PDCD6-203ENST00000505526 FOXN1O15353 648 aa20.57■□□□□ 0.88
PDCD6-203ENST00000505526 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
PDCD6-203ENST00000505526 APAF1O14727 1248 aa20.56■□□□□ 0.88
PDCD6-203ENST00000505526 NPR1P16066 1061 aa20.56■□□□□ 0.88
PDCD6-203ENST00000505526 CLEC4GQ6UXB4 293 aa20.56■□□□□ 0.88
PDCD6-203ENST00000505526 SCN4AP35499 1836 aa20.56■□□□□ 0.88
PDCD6-203ENST00000505526 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
PDCD6-203ENST00000505526 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
PDCD6-203ENST00000505526 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
PDCD6-203ENST00000505526 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
PDCD6-203ENST00000505526 EAPPQ56P03 285 aaPredicted RBP20.55■□□□□ 0.88
PDCD6-203ENST00000505526 KLRG2A4D1S0 409 aaPredicted RBP20.54■□□□□ 0.88
PDCD6-203ENST00000505526 TMEM88BA6NKF7 163 aa20.54■□□□□ 0.88
PDCD6-203ENST00000505526 ITGBL1O95965 494 aaPredicted RBP20.54■□□□□ 0.88
PDCD6-203ENST00000505526 VEGFBP49765 207 aa20.54■□□□□ 0.88
PDCD6-203ENST00000505526 HNRNPUQ00839 825 aaKnown RBP eCLIP20.54■□□□□ 0.88
PDCD6-203ENST00000505526 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
PDCD6-203ENST00000505526 ZNF277Q9NRM2 450 aaPredicted RBP20.54■□□□□ 0.88
PDCD6-203ENST00000505526 ZNF541Q9H0D2 1346 aa20.54■□□□□ 0.88
PDCD6-203ENST00000505526 TPTE2Q6XPS3 522 aa20.53■□□□□ 0.88
PDCD6-203ENST00000505526 AIDAQ96BJ3 306 aa20.53■□□□□ 0.88
PDCD6-203ENST00000505526 HACL1Q9UJ83 578 aa20.53■□□□□ 0.88
PDCD6-203ENST00000505526 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
PDCD6-203ENST00000505526 SNRPA1P09661 255 aaKnown RBP20.52■□□□□ 0.88
PDCD6-203ENST00000505526 NFE2L2Q16236 605 aa20.52■□□□□ 0.88
PDCD6-203ENST00000505526 OLFM4Q6UX06 510 aa20.52■□□□□ 0.88
PDCD6-203ENST00000505526 CLEC11AQ9Y240 323 aa20.52■□□□□ 0.88
PDCD6-203ENST00000505526 TMPOP42166 694 aaKnown RBP20.51■□□□□ 0.87
PDCD6-203ENST00000505526 CTCFP49711 727 aaPredicted RBP20.51■□□□□ 0.87
PDCD6-203ENST00000505526 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
PDCD6-203ENST00000505526 RTKN2Q8IZC4 609 aa20.51■□□□□ 0.87
PDCD6-203ENST00000505526 NIP7Q9Y221 180 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDCD6-203ENST00000505526 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
PDCD6-203ENST00000505526 EPHX2P34913 555 aa20.5■□□□□ 0.87
PDCD6-203ENST00000505526 FAM177BA6PVY3 158 aa20.5■□□□□ 0.87
PDCD6-203ENST00000505526 NBPF26B4DH59 902 aa20.49■□□□□ 0.87
PDCD6-203ENST00000505526 RGL2O15211 777 aa20.49■□□□□ 0.87
PDCD6-203ENST00000505526 RIPK4P57078 832 aa20.49■□□□□ 0.87
PDCD6-203ENST00000505526 NBPF10Q6P3W6 841 aaKnown RBP20.49■□□□□ 0.87
PDCD6-203ENST00000505526 MCM10Q7L590 875 aa20.49■□□□□ 0.87
PDCD6-203ENST00000505526 PNMA8AQ86V59 439 aaPredicted RBP20.49■□□□□ 0.87
PDCD6-203ENST00000505526 NBPF15Q8N660 670 aa20.49■□□□□ 0.87
PDCD6-203ENST00000505526 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
PDCD6-203ENST00000505526 ADAMTSL1Q8N6G6 1762 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms