RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 NBPF5PQ86XG9 351 aaPredicted RBP28.56■■■□□ 2.16
RNF4-205ENST00000504224 CNKSR1Q969H4 720 aa28.56■■■□□ 2.16
RNF4-205ENST00000504224 CLEC4GQ6UXB4 293 aa28.55■■■□□ 2.16
RNF4-205ENST00000504224 MIS18AQ9NYP9 233 aa28.55■■■□□ 2.16
RNF4-205ENST00000504224 COL11A2P13942 1736 aaPredicted RBP28.55■■■□□ 2.16
RNF4-205ENST00000504224 STYK1Q6J9G0 422 aa28.54■■■□□ 2.16
RNF4-205ENST00000504224 WDR90Q96KV7 1748 aa28.54■■■□□ 2.16
RNF4-205ENST00000504224 BCORQ6W2J9 1755 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 NBPF26B4DH59 902 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 SRGNP10124 158 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 ERFEQ4G0M1 354 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 DPY19L2Q6NUT2 758 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 NBPF10Q6P3W6 841 aaKnown RBP28.53■■■□□ 2.16
RNF4-205ENST00000504224 NBPF15Q8N660 670 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 MASTLQ96GX5 879 aa28.53■■■□□ 2.16
RNF4-205ENST00000504224 TIAM2Q8IVF5 1701 aa28.52■■■□□ 2.16
RNF4-205ENST00000504224 PRPF40BQ6NWY9 871 aaKnown RBP28.52■■■□□ 2.16
RNF4-205ENST00000504224 TAOK3Q9H2K8 898 aa28.51■■■□□ 2.15
RNF4-205ENST00000504224 NIP7Q9Y221 180 aaKnown RBP eCLIP28.51■■■□□ 2.15
RNF4-205ENST00000504224 FAM177BA6PVY3 158 aa28.5■■■□□ 2.15
RNF4-205ENST00000504224 KLRG1Q96E93 195 aa28.5■■■□□ 2.15
RNF4-205ENST00000504224 CCDC88AQ3V6T2 1871 aa28.5■■■□□ 2.15
RNF4-205ENST00000504224 SOGA3Q5TF21 947 aa28.48■■■□□ 2.15
RNF4-205ENST00000504224 TPTE2Q6XPS3 522 aa28.48■■■□□ 2.15
RNF4-205ENST00000504224 LTBP3Q9NS15 1303 aa28.47■■■□□ 2.15
RNF4-205ENST00000504224 NGEFQ8N5V2 710 aa28.47■■■□□ 2.15
RNF4-205ENST00000504224 PNISRQ8TF01 805 aaKnown RBP28.46■■■□□ 2.15
RNF4-205ENST00000504224 SLX4Q8IY92 1834 aa28.46■■■□□ 2.15
RNF4-205ENST00000504224 NPR1P16066 1061 aa28.45■■■□□ 2.14
RNF4-205ENST00000504224 POTECB2RU33 542 aa28.44■■■□□ 2.14
RNF4-205ENST00000504224 GTF2E1P29083 439 aaPredicted RBP28.44■■■□□ 2.14
RNF4-205ENST00000504224 HLFQ16534 295 aa28.44■■■□□ 2.14
RNF4-205ENST00000504224 FER1L6Q2WGJ9 1857 aa28.44■■■□□ 2.14
RNF4-205ENST00000504224 NFE2L2Q16236 605 aa28.43■■■□□ 2.14
RNF4-205ENST00000504224 PLEKHF1Q96S99 279 aa28.43■■■□□ 2.14
RNF4-205ENST00000504224 THUMPD2Q9BTF0 503 aaKnown RBP28.43■■■□□ 2.14
RNF4-205ENST00000504224 CACNA1SQ13698 1873 aa28.42■■■□□ 2.14
RNF4-205ENST00000504224 RGL2O15211 777 aa28.42■■■□□ 2.14
RNF4-205ENST00000504224 CCDC93Q567U6 631 aa28.42■■■□□ 2.14
RNF4-205ENST00000504224 MAPK8IP3Q9UPT6 1336 aa28.42■■■□□ 2.14
RNF4-205ENST00000504224 RRP7AQ9Y3A4 280 aaKnown RBP28.41■■■□□ 2.14
RNF4-205ENST00000504224 DDNO94850 711 aaPredicted RBP28.4■■■□□ 2.14
RNF4-205ENST00000504224 PNNQ9H307 717 aaKnown RBP28.4■■■□□ 2.14
RNF4-205ENST00000504224 EIF4A1P60842 406 aaKnown RBP28.39■■■□□ 2.14
RNF4-205ENST00000504224 JMYQ8N9B5 988 aa28.39■■■□□ 2.14
RNF4-205ENST00000504224 C7orf43Q8WVR3 580 aa28.39■■■□□ 2.14
RNF4-205ENST00000504224 KLRG2A4D1S0 409 aaPredicted RBP28.38■■■□□ 2.13
RNF4-205ENST00000504224 MYL6BP14649 208 aa28.38■■■□□ 2.13
RNF4-205ENST00000504224 KIF6Q6ZMV9 814 aa28.38■■■□□ 2.13
RNF4-205ENST00000504224 DICER1Q9UPY3 1922 aaKnown RBP28.37■■■□□ 2.13
RNF4-205ENST00000504224 LAMB4A4D0S4 1761 aa28.37■■■□□ 2.13
RNF4-205ENST00000504224 ARFGEF2Q9Y6D5 1785 aa28.37■■■□□ 2.13
RNF4-205ENST00000504224 DLG5Q8TDM6 1919 aa28.36■■■□□ 2.13
RNF4-205ENST00000504224 OLFM4Q6UX06 510 aa28.36■■■□□ 2.13
RNF4-205ENST00000504224 TTLL7Q6ZT98 887 aa28.36■■■□□ 2.13
RNF4-205ENST00000504224 NYXQ9GZU5 481 aa28.36■■■□□ 2.13
RNF4-205ENST00000504224 MAP3K15Q6ZN16 1313 aa28.36■■■□□ 2.13
RNF4-205ENST00000504224 ERVV-1B6SEH8 477 aa28.35■■■□□ 2.13
RNF4-205ENST00000504224 FKBP4Q02790 459 aaKnown RBP eCLIP28.35■■■□□ 2.13
RNF4-205ENST00000504224 NUTM1Q86Y26 1132 aa28.35■■■□□ 2.13
RNF4-205ENST00000504224 ZNF277Q9NRM2 450 aaPredicted RBP28.35■■■□□ 2.13
RNF4-205ENST00000504224 KDM3BQ7LBC6 1761 aa28.34■■■□□ 2.13
RNF4-205ENST00000504224 ALDH1B1P30837 517 aa28.34■■■□□ 2.13
RNF4-205ENST00000504224 ZBTB3Q9H5J0 574 aa28.34■■■□□ 2.13
RNF4-205ENST00000504224 GPTP24298 496 aa28.33■■■□□ 2.13
RNF4-205ENST00000504224 RTKN2Q8IZC4 609 aa28.33■■■□□ 2.13
RNF4-205ENST00000504224 CHADLQ6NUI6 762 aa28.32■■■□□ 2.12
RNF4-205ENST00000504224 TSPYL4Q9UJ04 414 aa28.32■■■□□ 2.12
RNF4-205ENST00000504224 ABCC12Q96J65 1359 aa28.31■■■□□ 2.12
RNF4-205ENST00000504224 IQCA1LA6NCM1 817 aa28.3■■■□□ 2.12
RNF4-205ENST00000504224 POTEIP0CG38 1075 aa28.3■■■□□ 2.12
RNF4-205ENST00000504224 POTEJP0CG39 1038 aa28.3■■■□□ 2.12
RNF4-205ENST00000504224 RPGRQ92834 1020 aaKnown RBP28.29■■■□□ 2.12
RNF4-205ENST00000504224 ZNF541Q9H0D2 1346 aa28.28■■■□□ 2.12
RNF4-205ENST00000504224 RIPK4P57078 832 aa28.28■■■□□ 2.12
RNF4-205ENST00000504224 SYNE4Q8N205 404 aa28.28■■■□□ 2.12
RNF4-205ENST00000504224 UBN2Q6ZU65 1347 aa28.27■■■□□ 2.12
RNF4-205ENST00000504224 EIF2S2P20042 333 aaKnown RBP28.27■■■□□ 2.12
RNF4-205ENST00000504224 IARSP41252 1262 aaKnown RBP28.26■■■□□ 2.11
RNF4-205ENST00000504224 RALBP1Q15311 655 aa28.26■■■□□ 2.11
RNF4-205ENST00000504224 CRY2Q49AN0 593 aa28.26■■■□□ 2.11
RNF4-205ENST00000504224 SUSD4Q5VX71 490 aa28.26■■■□□ 2.11
RNF4-205ENST00000504224 L3MBTL3Q96JM7 780 aaPredicted RBP28.26■■■□□ 2.11
RNF4-205ENST00000504224 ERBB4Q15303 1308 aa28.25■■■□□ 2.11
RNF4-205ENST00000504224 TAF1DQ9H5J8 278 aaPredicted RBP28.25■■■□□ 2.11
RNF4-205ENST00000504224 EAPPQ56P03 285 aaPredicted RBP28.24■■■□□ 2.11
RNF4-205ENST00000504224 COL13A1Q5TAT6 717 aaPredicted RBP28.24■■■□□ 2.11
RNF4-205ENST00000504224 LDHDQ86WU2 507 aa28.24■■■□□ 2.11
RNF4-205ENST00000504224 NUP98P52948 1817 aa28.24■■■□□ 2.11
RNF4-205ENST00000504224 GIGYF2Q6Y7W6 1299 aaKnown RBP28.23■■■□□ 2.11
RNF4-205ENST00000504224 ZNF34Q8IZ26 560 aa28.23■■■□□ 2.11
RNF4-205ENST00000504224 IBTKQ9P2D0 1353 aaPredicted RBP28.23■■■□□ 2.11
RNF4-205ENST00000504224 PPP1R42Q7Z4L9 355 aa28.22■■■□□ 2.11
RNF4-205ENST00000504224 JDP2Q8WYK2 163 aa28.22■■■□□ 2.11
RNF4-205ENST00000504224 CREBZFQ9NS37 354 aa28.22■■■□□ 2.11
RNF4-205ENST00000504224 HACL1Q9UJ83 578 aa28.22■■■□□ 2.11
RNF4-205ENST00000504224 TCERG1O14776 1098 aaKnown RBP28.21■■■□□ 2.11
RNF4-205ENST00000504224 NTSR2O95665 410 aa28.21■■■□□ 2.11
RNF4-205ENST00000504224 TMPOP42166 694 aaKnown RBP28.21■■■□□ 2.11
RNF4-205ENST00000504224 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms